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Aliases for ZNF22-AS1 Gene
Data sources for ZNF22-AS1 Gene:
Subcategory (RNA class) for ZNF22-AS1 Gene
lncRNA
Aliases for ZNF22-AS1 Gene
- ZNF22 Antisense RNA 1 (HGNC, NCBI Entrez Gene, UniProtKB/Swiss-Prot, Ensembl)
- C10orf25 (NCBI Entrez Gene, UniProtKB/Swiss-Prot)
- Chromosome 10 Open Reading Frame 25 (HGNC)
- Uncharacterized Protein ZNF22-AS1 (UniProtKB/Swiss-Prot)
- Uncharacterized Protein C10orf25 (NCBI Entrez Gene)
- HSALNG0077645 (LncBook)
- Lnc-DEPP1-6 (LNCipedia)
- ZNF22-AS1 (Ensembl)
- FLJ30567 (HGNC)
External Ids for ZNF22-AS1 Gene
- HGNC: 23509
- NCBI Entrez Gene: 220979
- Ensembl: ENSG00000165511
- UniProtKB/Swiss-Prot: Q5T742
Previous HGNC Symbols for ZNF22-AS1 Gene
- C10orf25
Summaries for ZNF22-AS1 Gene
GeneCards Summary for ZNF22-AS1 Gene
ZNF22-AS1 (ZNF22 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for ZNF22-AS1 Gene
- HGNC (23509)
- NCBI Entrez Gene (220979)
- Ensembl (ENSG00000165511)
- UniProtKB/Swiss-Prot (Q5T742)
- Open Targets Platform(ENSG00000165511)
- Search for ZNF22-AS1 at DataMed
- Search for ZNF22-AS1 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF22-AS1 Gene
Genomics for ZNF22-AS1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ZNF22-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ZNF22-AS1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for ZNF22-AS1 Gene
Latest Assembly
- chr10:44,991,939-45,000,910
- (GRCh38/hg38)
- Size:
- 8,972 bases
- Orientation:
- Minus strand
Previous Assembly
- chr10:45,489,380-45,496,251
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 6,872 bases
- Orientation:
- Minus strand
- chr10:45,493,146-45,496,336
- (GRCh37/hg19 by Ensembl)
- Size:
- 3,191 bases
- Orientation:
- Minus strand
Genomic View for ZNF22-AS1 Gene
Genes around ZNF22-AS1 on UCSC Golden Path with GeneCards custom track
ZNF22-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 10q11.21 by HGNC
- 10q11.21 by Entrez Gene
- 10q11.21 by Ensembl
ZNF22-AS1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ZNF22-AS1 Gene
Proteins for ZNF22-AS1 Gene
-
Protein details for ZNF22-AS1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q5T742-ZFAS1_HUMAN
- Recommended name:
- Uncharacterized protein ZNF22-AS1
- Protein Accession:
- Q5T742
- A1L424
- Q96NM5
Protein attributes for ZNF22-AS1 Gene
- Size:
- 122 amino acids
- Molecular mass:
- 14441 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for ZNF22-AS1 Gene
Antibodies for research
-
Custom Antibody ServicesOriGene Antibodies for ZNF22-AS1
- Invitrogen Antibodies for ZNF22-AS1 (AFLGC-C10orf25)
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ZNF22-AS1
- Origene Custom Protein Services for ZNF22-AS1
Assay products for research
No data available for DME Specific Peptides for ZNF22-AS1 Gene
Domains & Families for ZNF22-AS1 Gene
Gene Families for ZNF22-AS1 Gene
- HGNC:
Protein Domains for ZNF22-AS1 Gene
- ProtoNet:
No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZNF22-AS1 Gene
Function for ZNF22-AS1 Gene
Phenotypes From GWAS Catalog for ZNF22-AS1 Gene
Phenotypes for ZNF22-AS1 Gene
- GenomeRNAi human phenotypes for ZNF22-AS1:
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ZNF22-AS1 - Starting at $85 >
- * ZNF22-AS1 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
-
OriGene CRISPR knockouts for ZNF22-AS1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZNF22-AS1
Inhibitory RNAs for research
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZNF22-AS1
- Browse OriGene Inhibitory RNA Products For ZNF22-AS1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF22-AS1
Clone products for research
- Applied Biological Materials (abm): Clones for ZNF22-AS1 - Starting at $45 >
- * ZNF22-AS1 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
-
OriGene ORF clones in human for ZNF22-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZNF22-AS1
Cell Lines for research
-
Horizon Cell Lines for ZNF22-AS1
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF22-AS1 Gene
Localization for ZNF22-AS1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for ZNF22-AS1 Gene
- Secreted.
| Compartment | Confidence |
|---|---|
| extracellular | 4 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005576 | extracellular region | IEA | -- |
No data available for Subcellular locations from the Human Protein Atlas (HPA) for ZNF22-AS1 Gene
Transcripts for ZNF22-AS1 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for ZNF22-AS1 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00007CAE77_9606 | lncRNA | 3080 | 2 |
Ensembl: ENST00000625168 (view in UCSC) , LNCipedia: lnc-DEPP1-6:1, |
| URS0000EEAC8C_9606 | lncRNA | 2993 | 1 |
RefSeq: NR_164113, |
| URS0000EEACA5_9606 | lncRNA | 786 | 1 |
RefSeq: NR_126421, |
| URS0001BF558E_9606 | lncRNA | 1551 | 1 |
LncBook: HSALNT0162110, |
| URS0001BDDEC0_9606 | lncRNA | 893 | 1 |
LncBook: HSALNT0162111, |
ZNF22-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for ZNF22-AS1 Gene
- 1 REFSEQ mRNAs :
- 8 NCBI additional mRNA sequence :
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ZNF22-AS1 - Starting at $85 >
- * ZNF22-AS1 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
-
OriGene CRISPR knockouts for ZNF22-AS1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZNF22-AS1
Inhibitory RNAs for research
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZNF22-AS1
- Browse OriGene Inhibitory RNA Products For ZNF22-AS1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF22-AS1
Clone products for research
- Applied Biological Materials (abm): Clones for ZNF22-AS1 - Starting at $45 >
- * ZNF22-AS1 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
-
OriGene ORF clones in human for ZNF22-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZNF22-AS1
Relevant External Links for ZNF22-AS1 Gene
- GeneLoc Exon Structure for
- ZNF22-AS1
Expression for ZNF22-AS1 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF22-AS1
SOURCE GeneReport for Unigene cluster for ZNF22-AS1 Gene:
Hs.707791Evidence on tissue expression from TISSUES for ZNF22-AS1 Gene
- Nervous system(4)
No Expression Related Data Available
Primer products for research
-
OriGene qPCR primer pairs for ZNF22-AS1
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF22-AS1 Gene
Orthologs for ZNF22-AS1 Gene
This gene was present in the common ancestor of human and chimp.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Chimpanzee (Pan troglodytes) |
Mammalia | C10orf25 31 |
|
OneToOne |
- Species where no ortholog for ZNF22-AS1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- Cow (Bos Taurus)
- Dog (Canis familiaris)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Fruit Fly (Drosophila melanogaster)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Lizard (Anolis carolinensis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Mouse (Mus musculus)
- Oppossum (Monodelphis domestica)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Platypus (Ornithorhynchus anatinus)
- Rainbow Trout (Oncorhynchus mykiss)
- Rat (Rattus norvegicus)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Squirt (Ciona savignyi)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Tropical Clawed Frog (Silurana tropicalis)
- Wheat (Triticum aestivum)
- Worm (Caenorhabditis elegans)
- Zebrafish (Danio rerio)
Paralogs for ZNF22-AS1 Gene
No data available for Paralogs for ZNF22-AS1 Gene
Variants for ZNF22-AS1 Gene
Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZNF22-AS1 Gene
| SNP ID | Clinical significance and condition | Chr 10 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs12269028 | - |
p.Ile63Asn |
|||
| rs41301609 | - |
p.Pro61Leu |
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv3576560 | CNV | gain | 25503493 |
| esv3623079 | CNV | loss | 21293372 |
| esv3623080 | CNV | gain | 21293372 |
| nsv831846 | CNV | loss | 17160897 |
| nsv831848 | CNV | gain | 17160897 |
Residual Variation Intolerance Score:
81.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
3.43;
54.63% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for ZNF22-AS1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ZNF22-AS1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF22-AS1 Gene
Disorders for ZNF22-AS1 Gene
Additional Disease Information for ZNF22-AS1
- Atlas
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
- Open Targets Platform
- Open Targets Platform
No disorders were found for ZNF22-AS1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF22-AS1 Gene
Publications for ZNF22-AS1 Gene
- The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P … Rogers J (Nature 2004) 3 4
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4
- Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei. (PMID: 30021884) Fasci D … Heck AJR (Molecular & cellular proteomics : MCP 2018) 3
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
- A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease. (PMID: 16385451) Grupe A … Goate A (American journal of human genetics 2006) 3
No data available for Mastermind for ZNF22-AS1 Gene
Products for ZNF22-AS1 Gene
- Custom Antibody ServicesOriGene Antibodies for ZNF22-AS1
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ZNF22-AS1
- Origene Custom Protein Services for ZNF22-AS1
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZNF22-AS1
- Browse OriGene Inhibitory RNA Products For ZNF22-AS1
- OriGene qPCR primer pairs for ZNF22-AS1
- OriGene CRISPR knockouts for ZNF22-AS1
- OriGene ORF clones in human for ZNF22-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ZNF22-AS1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Invitrogen Antibodies for ZNF22-AS1 (AFLGC-C10orf25)
- Horizon Cell Lines for ZNF22-AS1
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZNF22-AS1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZNF22-AS1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ZNF22-AS1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF22-AS1
Sources for ZNF22-AS1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB