Aliases for ZNF213-AS1 Gene

Subcategory (RNA class) for ZNF213-AS1 Gene

lncRNA

Number of RNA Genes sources:

4 / 17

Aliases for ZNF213-AS1 Gene

  • ZNF213 Antisense RNA 1 (Head To Head) 2 3 5
  • ZNF213-AS1 2 5
  • NONHSAG018392.2 91
  • Lnc-ZSCAN10-3 165
  • HSALNG0109122 164
  • Lnc-ZSCAN10-7 165

External Ids for ZNF213-AS1 Gene

Previous GeneCards Identifiers for ZNF213-AS1 Gene

  • GC16M003116

Summaries for ZNF213-AS1 Gene

GeneCards Summary for ZNF213-AS1 Gene

ZNF213-AS1 (ZNF213 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for ZNF213-AS1 Gene

  • Metazoan signal recognition particle RNA

Additional gene information for ZNF213-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ZNF213-AS1 Gene

Genomics for ZNF213-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ZNF213-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF213-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ZNF213-AS1 Gene

Genomic Locations for ZNF213-AS1 Gene
chr16:3,100,682-3,150,540
(GRCh38/hg38)
Size:
49,859 bases
Orientation:
Minus strand
chr16:3,166,043-3,184,883
(GRCh37/hg19)
Size:
18,841 bases
Orientation:
Minus strand

Genomic View for ZNF213-AS1 Gene

Genes around ZNF213-AS1 on UCSC Golden Path with GeneCards custom track
ZNF213-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ZNF213-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF213-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF213-AS1 Gene

Proteins for ZNF213-AS1 Gene

Post-translational modifications for ZNF213-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF213-AS1 Gene

Domains & Families for ZNF213-AS1 Gene

Gene Families for ZNF213-AS1 Gene

genes like me logo Genes that share domains with ZNF213-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZNF213-AS1 Gene

Function for ZNF213-AS1 Gene

Phenotypes From GWAS Catalog for ZNF213-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF213-AS1 Gene

Localization for ZNF213-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF213-AS1 Gene

Pathways & Interactions for ZNF213-AS1 Gene

PathCards logo

SuperPathways for ZNF213-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF213-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZNF213-AS1 Gene

Drugs & Compounds for ZNF213-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF213-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ZNF213-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000E8799_9606 lncRNA 580 4

Ensembl: ENST00000577163 (view in UCSC) ,

LncBook: HSALNT0226884,

LNCipedia: lnc-ZSCAN10-3:5,

NONCODE: NONHSAT147974.2,

URS0000202A5A_9606 lncRNA 530 4

Ensembl: ENST00000575139 (view in UCSC) ,

LncBook: HSALNT0226860,

LNCipedia: lnc-ZSCAN10-3:6,

NONCODE: NONHSAT147964.2,

URS00009C60F3_9606 lncRNA 3232 3

Ensembl: ENST00000572691 (view in UCSC) ,

LncBook: HSALNT0226855,

LNCipedia: lnc-ZSCAN10-3:24,

URS00005368F4_9606 lncRNA 461 3

Ensembl: ENST00000573414 (view in UCSC) ,

LNCipedia: lnc-ZSCAN10-3:9,

NONCODE: NONHSAT147966.2,

URS00004DFBCB_9606 lncRNA 1592 2

Ensembl: ENST00000571963 (view in UCSC) ,

LNCipedia: lnc-ZSCAN10-3:1,

ZNF213-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ZNF213-AS1 Gene

4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF213-AS1 Gene

No ASD Table

Relevant External Links for ZNF213-AS1 Gene

GeneLoc Exon Structure for
ZNF213-AS1

Expression for ZNF213-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF213-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF213-AS1

genes like me logo Genes that share expression patterns with ZNF213-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF213-AS1 Gene

Orthologs for ZNF213-AS1 Gene

Evolution for ZNF213-AS1 Gene

ENSEMBL:
Gene Tree for ZNF213-AS1 (if available)
TreeFam:
Gene Tree for ZNF213-AS1 (if available)

No data available for Orthologs for ZNF213-AS1 Gene

Paralogs for ZNF213-AS1 Gene

No data available for Paralogs for ZNF213-AS1 Gene

Variants for ZNF213-AS1 Gene

Additional dbSNP identifiers (rs#s) for ZNF213-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for ZNF213-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv457355 CNV gain 19166990
nsv509589 CNV insertion 20534489
nsv571248 CNV loss 21841781
nsv571249 CNV gain 21841781
nsv833125 CNV loss 17160897

Additional Variant Information for ZNF213-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF213-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for ZNF213-AS1 Gene

Disorders for ZNF213-AS1 Gene

No disorders were found for ZNF213-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF213-AS1 Gene

Publications for ZNF213-AS1 Gene

  1. Genome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study. (PMID: 23934736) Yu B … Boerwinkle E (Genetic epidemiology 2013) 3

No data available for Mastermind for ZNF213-AS1 Gene

Products for ZNF213-AS1 Gene

Sources for ZNF213-AS1 Gene