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This gene encodes a member of the Kruppel C2H2-type zinc-finger family of proteins. This encoded protein may function as a transcription factor that regulates the expression of GABA type-A receptors in the brain. Transcripts from this gene have been shown to form stable and abundant circular RNAs. Elevated expression of this gene has been observed in gastric cancer and the enco... See more...
Aliases for ZKSCAN1 Gene
Aliases for ZKSCAN1 Gene
External Ids for ZKSCAN1 Gene
- HGNC: 13101
- Entrez Gene: 7586
- Ensembl: ENSG00000106261
- OMIM: 601260
- UniProtKB: P17029
Previous HGNC Symbols for ZKSCAN1 Gene
- ZNF139
- ZNF36
Previous GeneCards Identifiers for ZKSCAN1 Gene
- GC07P099261
- GC07P099451
- GC07P099616
- GC07P094248
Summaries for ZKSCAN1 Gene
-
This gene encodes a member of the Kruppel C2H2-type zinc-finger family of proteins. This encoded protein may function as a transcription factor that regulates the expression of GABA type-A receptors in the brain. Transcripts from this gene have been shown to form stable and abundant circular RNAs. Elevated expression of this gene has been observed in gastric cancer and the encoded protein may stimulate migration and invasion of human gastric cancer cells. [provided by RefSeq, Oct 2016]
GeneCards Summary for ZKSCAN1 Gene
ZKSCAN1 (Zinc Finger With KRAB And SCAN Domains 1) is a Protein Coding gene. Diseases associated with ZKSCAN1 include Basaloid Lung Carcinoma and Gastric Cancer. Among its related pathways are Gene Expression. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and DNA-binding transcription factor activity. An important paralog of this gene is ZNF263.
UniProtKB/Swiss-Prot Summary for ZKSCAN1 Gene
-
May be involved in transcriptional regulation.
Additional gene information for ZKSCAN1 Gene
No data available for CIViC Summary , Tocris Summary , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZKSCAN1 Gene
Genomics for ZKSCAN1 Gene
GeneHancer (GH) Regulatory Elements for ZKSCAN1 Gene
Promoters and enhancers for ZKSCAN1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ZKSCAN1 on UCSC Golden Path with GeneCards custom track
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for ZKSCAN1
- Top Transcription factor binding sites by QIAGEN in the ZKSCAN1 gene promoter:
-
- AML1a
- c-Ets-1
- En-1
- GR
- GR-alpha
- HOXA5
- HTF
- NRF-2
- STAT1
Genomic Locations for ZKSCAN1 Gene
Genomic Locations for ZKSCAN1 Gene
- chr7:100,015,572-100,045,143
- (GRCh38/hg38)
- Size:
- 29,572 bases
- Orientation:
- Plus strand
- chr7:99,613,204-99,639,312
- (GRCh37/hg19)
- Size:
- 26,109 bases
- Orientation:
- Plus strand
Genomic View for ZKSCAN1 Gene
Genes around ZKSCAN1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 7q22.1 by HGNC
- 7q22.1 by Entrez Gene
- 7q22.1 by Ensembl
ZKSCAN1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ZKSCAN1 Gene
Proteins for ZKSCAN1 Gene
-
Protein details for ZKSCAN1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- P17029-ZKSC1_HUMAN
- Recommended name:
- Zinc finger protein with KRAB and SCAN domains 1
- Protein Accession:
- P17029
- A4D294
- P52745
- Q2M1U1
- Q8TBW5
- Q8TEK7
Protein attributes for ZKSCAN1 Gene
- Size:
- 563 amino acids
- Molecular mass:
- 63630 Da
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=AAC50264.1; Type=Frameshift; Evidence={ECO:0000305};
Protein Expression for ZKSCAN1 Gene
Post-translational modifications for ZKSCAN1 Gene
Other Protein References for ZKSCAN1 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Creative Diagnostics Anti-ZKSCAN1 monoclonal antibody
- Creative Biolabs Recombinant Human Anti-Human ZKSCAN1 Antibody, clone D573
- Novus Biologicals Antibodies for ZKSCAN1
-
Abcam antibodies for ZKSCAN1
- Invitrogen Antibodies for ZKSCAN1 (AFLGC-ZKSCAN1)
Protein Products
-
OriGene Purified Proteins for ZKSCAN1
- Search Origene for MassSpec and Protein Over-expression Lysates for ZKSCAN1
- Origene Custom Protein Services for ZKSCAN1
- antibodies-online: Show 4 available ZKSCAN1 Proteins ranked by validation data
- Compare Top ZKSCAN1 Proteins
-
Quality Products:
-
Abcam proteins for ZKSCAN1
No data available for DME Specific Peptides for ZKSCAN1 Gene
Domains & Families for ZKSCAN1 Gene
Gene Families for ZKSCAN1 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
- Transcription factors
Protein Domains for ZKSCAN1 Gene
- Blocks:
-
- C2H2-type zinc finger signature
- KRAB box
- Transcriptional regulator SCAN
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for ZKSCAN1 Gene
- GenScript: Design optimal peptide antigens:
-
- cDNA FLJ34152 fis, clone FCBBF3012901, highly similar to Zinc finger with KRAB and SCAN domain-containing protein 1 (B3KRF7_HUMAN)
- ZKSCAN1 protein (Q96FA2_HUMAN)
- Zinc finger protein KOX18 (ZKSC1_HUMAN)
Graphical View of Domain Structure for InterPro Entry
P17029- Family:
-
- Belongs to the krueppel C2H2-type zinc-finger protein family.
Function for ZKSCAN1 Gene
Molecular function for ZKSCAN1 Gene
- UniProtKB/Swiss-Prot Function:
- May be involved in transcriptional regulation.
Phenotypes From GWAS Catalog for ZKSCAN1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | -- |
| GO:0003700 | DNA-binding transcription factor activity | NAS,IEA | 7557990 |
| GO:0005515 | protein binding | IPI | 25416956 |
| GO:0046872 | metal ion binding | IEA | -- |
Phenotypes for ZKSCAN1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZKSCAN1 - Select products 50% OFF >
- * ZKSCAN1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * ZKSCAN1 CRISPR applications: KO, Activation, Repression, and more - Browse All
-
OriGene CRISPR knockouts for ZKSCAN1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZKSCAN1
- genomics-online: gRNA clones - Search results for available ZKSCAN1 gene related products
-
Santa Cruz Biotechnology (SCBT) CRISPR for ZKSCAN1
miRNA for ZKSCAN1 Gene
- miRTarBase miRNAs that target ZKSCAN1
-
- hsa-mir-155-5p (MIRT439231)
- hsa-mir-7154-5p (MIRT489486)
- hsa-mir-8060 (MIRT489487)
- hsa-mir-5571-5p (MIRT489488)
- hsa-mir-6869-5p (MIRT608713)
- hsa-mir-1200 (MIRT608714)
- hsa-mir-7151-3p (MIRT608715)
- hsa-mir-5095 (MIRT608716)
- hsa-mir-365b-5p (MIRT608717)
- hsa-mir-365a-5p (MIRT608718)
- hsa-mir-8052 (MIRT608719)
- hsa-mir-3199 (MIRT608720)
- hsa-mir-6789-3p (MIRT608721)
- hsa-mir-6829-3p (MIRT608722)
- hsa-mir-6791-3p (MIRT608723)
- hsa-mir-3653-5p (MIRT608724)
- hsa-mir-544b (MIRT608725)
- hsa-mir-4324 (MIRT608726)
- hsa-mir-660-3p (MIRT608727)
- hsa-mir-4438 (MIRT608728)
- hsa-mir-6509-5p (MIRT632199)
- hsa-mir-6836-3p (MIRT632200)
- hsa-mir-5001-3p (MIRT632201)
- hsa-mir-4772-3p (MIRT632202)
- hsa-mir-6778-3p (MIRT632203)
- hsa-mir-8057 (MIRT639827)
- hsa-mir-24-3p (MIRT639828)
- hsa-mir-4284 (MIRT639829)
- hsa-mir-2116-3p (MIRT639830)
- hsa-mir-1304-3p (MIRT639831)
- hsa-mir-1281 (MIRT639832)
- hsa-mir-4485-5p (MIRT639833)
- hsa-mir-4716-5p (MIRT639834)
- hsa-mir-6890-3p (MIRT639835)
- hsa-mir-6802-5p (MIRT651266)
- hsa-mir-6800-5p (MIRT651267)
- hsa-mir-572 (MIRT651268)
- hsa-mir-3934-5p (MIRT651269)
- hsa-mir-764 (MIRT651270)
- hsa-mir-125a-3p (MIRT651271)
- hsa-mir-1306-5p (MIRT651272)
- hsa-mir-4465 (MIRT665260)
- hsa-mir-26b-5p (MIRT665261)
- hsa-mir-26a-5p (MIRT665262)
- hsa-mir-1297 (MIRT665263)
- hsa-mir-6513-3p (MIRT665264)
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZKSCAN1
- Browse OriGene Inhibitory RNA Products For ZKSCAN1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZKSCAN1
- genomics-online: shRNA clones - Search results for available ZKSCAN1 gene related products
Clone Products
- Applied Biological Materials (abm): Clones for ZKSCAN1 - Select products 50% OFF >
- * ZKSCAN1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * ZKSCAN1 tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
- Sino Biological Human cDNA Clone for ZKSCAN1
- Addgene plasmids for ZKSCAN1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZKSCAN1
- genomics-online: cdna clones - Search results for available ZKSCAN1 gene related products
- orf clones - Search results for available ZKSCAN1 gene related products
Cell Line Products
-
Horizon Cell Lines for ZKSCAN1
No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZKSCAN1 Gene
Localization for ZKSCAN1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for ZKSCAN1 Gene
- Nucleus.
| Compartment | Confidence |
|---|---|
| nucleus | 5 |
| mitochondrion | 2 |
| plasma membrane | 1 |
| extracellular | 1 |
| cytoskeleton | 1 |
| cytosol | 1 |
- Mitochondria (2)
- Nuclear bodies (2)
- Nucleoplasm (2)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005622 | intracellular | IEA | -- |
| GO:0005634 | nucleus | IEA,NAS | 7557990 |
Pathways & Interactions for ZKSCAN1 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | Gene Expression |
.48
|
|
Pathways by source for ZKSCAN1 Gene
2 Reactome pathways for ZKSCAN1 Gene
Interacting Proteins for ZKSCAN1 Gene
Selected Interacting proteins:
P17029-ZKSC1_HUMAN
ENSP00000323148
for ZKSCAN1 Gene via
UniProtKB
STRING
IID
GPS-Prot Interaction Network for ZKSCAN1
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | NAS,IEA | 7557990 |
No data available for SIGNOR curated interactions for ZKSCAN1 Gene
Drugs & Compounds for ZKSCAN1 Gene
| Name | Status | Disease Links | Group | Role | Mechanism of Action | Clinical Trials |
|---|---|---|---|---|---|---|
| Zinc | Approved, Investigational | Pharma | 2822 |
Transcripts for ZKSCAN1 Gene
mRNA/cDNA for ZKSCAN1 Gene
- 6 REFSEQ mRNAs :
- 19 NCBI additional mRNA sequence :
- 6 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000324306 9403 bps (ENST00000324306.11)
- ENST00000426572 2011 bps (ENST00000426572.5)
- ENST00000432317 573 bps (ENST00000432317.1)
- ENST00000482979 1449 bps (ENST00000482979.5)
- ENST00000535170 8758 bps (ENST00000535170.5)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZKSCAN1 - Select products 50% OFF >
- * ZKSCAN1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * ZKSCAN1 CRISPR applications: KO, Activation, Repression, and more - Browse All
-
OriGene CRISPR knockouts for ZKSCAN1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZKSCAN1
- genomics-online: gRNA clones - Search results for available ZKSCAN1 gene related products
-
Santa Cruz Biotechnology (SCBT) CRISPR for ZKSCAN1
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZKSCAN1
- Browse OriGene Inhibitory RNA Products For ZKSCAN1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZKSCAN1
- genomics-online: shRNA clones - Search results for available ZKSCAN1 gene related products
Clone Products
- Applied Biological Materials (abm): Clones for ZKSCAN1 - Select products 50% OFF >
- * ZKSCAN1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * ZKSCAN1 tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
- Sino Biological Human cDNA Clone for ZKSCAN1
- Addgene plasmids for ZKSCAN1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZKSCAN1
- genomics-online: cdna clones - Search results for available ZKSCAN1 gene related products
- orf clones - Search results for available ZKSCAN1 gene related products
| ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | · | 5c | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9a | · | 9b |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | ||||||||||||||||||||||
| SP2: | - | - | |||||||||||||||||||||
| SP3: | - | ||||||||||||||||||||||
| SP4: | - |
Relevant External Links for ZKSCAN1 Gene
- GeneLoc Exon Structure for
- ZKSCAN1
Expression for ZKSCAN1 Gene
This gene is overexpressed in Plasma (24.9), Islet of Langerhans (13.9), and Pancreas (6.6).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for ZKSCAN1 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZKSCAN1
SOURCE GeneReport for Unigene cluster for ZKSCAN1 Gene:
Hs.615360Evidence on tissue expression from TISSUES for ZKSCAN1 Gene
- Nervous system(4.7)
- Liver(4.5)
- Spleen(4.3)
- Lung(4.2)
- Stomach(2.3)
Primer Products
-
OriGene qPCR primer pairs for ZKSCAN1
-
OriGene qPCR primer pairs and template standards for ZKSCAN1
- genomics-online: primer clones - Search results for available ZKSCAN1 gene related products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZKSCAN1 Gene
Orthologs for ZKSCAN1 Gene
This gene was present in the common ancestor of mammals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | ZKSCAN1 31 30 |
|
OneToOne | |
| dog (Canis familiaris) |
Mammalia | ZKSCAN1 31 30 |
|
OneToOne | |
| cow (Bos Taurus) |
Mammalia | ZKSCAN1 31 30 |
|
OneToOne | |
| mouse (Mus musculus) |
Mammalia | Zkscan1 17 31 30 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Zkscan1 30 |
|
||
| oppossum (Monodelphis domestica) |
Mammalia | ZKSCAN1 31 |
|
OneToOne |
- Species where no ortholog for ZKSCAN1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Evolution for ZKSCAN1 Gene
- ENSEMBL:
- Gene Tree for ZKSCAN1 (if available)
- TreeFam:
- Gene Tree for ZKSCAN1 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for ZKSCAN1: view image
Paralogs for ZKSCAN1 Gene
Paralogs for ZKSCAN1 Gene
(515) SIMAP similar genes for ZKSCAN1 Gene using alignment to 5 proteins:
- ZKSC1_HUMAN
- B3KRF7_HUMAN
- C9JRM9_HUMAN
- E9PC66_HUMAN
- Q96FA2_HUMAN
- ZNF78L1
- kr-znf3
- ZNF818P
- ZNF304
- ZNF826P
- ZNF56
- ZNF271
- ZNF702P
- ZNF8
- ZNF444
- ZNF808
- ZNF286A
- ZNF765
- ZNF35
- DKFZp666C237
- ZNF55
- ZNF501
- ZNF883
- ZNF836
- ZNF484
- LOC100128510
- ZNF585B
- ZNF542
- ZNF383
- ZNF323
- ZNF662
- ZNF510
- ZNF492
- ZNF
- ZNF83
- ZNF585A
- ZNF664
- zf30
- ZNF879
- ZNF876P
- ZNF81
- ZNF787
- ZNF720
- ZNF624
- ZNF529
- ZNF416
- ZNF415
- ZNF286B
- ZNF256
- DKFZp666M039
- ZFS-5
- ZNF85
- ZNF566
- ZNF382
- ZNF257
- ZNF204
- ZNF850
- ZNF792
- ZNF790
- ZNF676
- ZNF667
- ZNF630
- ZNF569
- ZNF567
- ZNF446
- ZNF283
- ZNF227
- ZNF226
- ZFP1
- HZF36
- HZF30
- DKFZp762K012
- DKFZp686O111
- ZFS-4
- KIAA1829
- HZF16
- ZNF626
- ZNF781
- ZNF324
- ZNF880
- ZNF780B
- ZNF776
- ZNF708
- ZNF675
- ZNF616
- ZNF564
- ZNF554
- ZNF544
- ZNF473
- ZNF354A
- ZNF33A
- ZNF329
- ZNF273
- ZNF211
- ZNF14
- ZFP2
- ZFS-6
- HZF40
- DKFZp686M04222
- ZNF345
- ZNF697
- ZNF600
- smap-7
- ZNF72
- ZNF322
- ZSCAN20
- ZNF805
- ZNF724P
- ZNF549
- ZNF404
- ZNF282
- ZNF224
- ZNF132
- HZF14
- DKFZp434K202
- ZKSCAN8
- ZNF841
- ZNF234
- ZNF75A
- ZNF672
- ZNF627
- ZNF37A
- ZNF22
- ZNF98
- ZNF852
- ZNF721
- ZNF717
- ZNF674
- ZNF665
- ZNF658
- ZNF611
- ZNF606
- ZNF543
- ZNF43
- ZNF300
- ZNF248
- ZNF23
- ZNF214
- DKFZp686H20223
- DKFZp571N1833
- HZF11
- DKFZp434G1621
- ZNF551
- ZSCAN30
- ZNF737
- ZNF468
- ZNF583
- ZNF568
- ZNF684
- ZNF589
- ZNF137P
- ZNF891
- ZNF7
- ZNF699
- ZNF658B
- ZNF628
- ZNF615
- ZNF610
- ZNF45
- ZNF397
- ZNF239
- ZNF12
- ZNF112
- ZFP28
- PRDM1
- HZF41
- HKR1
- DKFZp686K03205
- ZSCAN10
- ZNF525
- ZIM3
- ZNF726P1
- ZNF599
- ZNF562
- ZNF502
- ZNF816
- ZNF774
- ZNF677
- ZNF613
- ZNF550
- ZNF540
- ZNF534
- ZNF430
- ZNF260
- ZNF26
- ZNF208
- ZNF180
- ZNF135
- ZNF100
- Nbla00121
- DKFZp434G1930
- ZFS-2
- SCAND1
- KLF1
- DKFZp686N0199
- DKFZp434J0650
- ZNF3
- ZSCAN18
- ZSCAN31
- ZNF681
- DKFZp686N14223
- ZSCAN9
- ZNF410
- ZNF157
- ZNF99
- ZNF814
- ZNF813
- ZNF782
- ZNF773
- ZNF729
- ZNF726
- ZNF71
- ZNF695
- ZNF660
- ZNF629
- ZNF596
- ZNF594
- ZNF530
- ZNF493
- ZNF479
- ZNF429
- ZNF418
- ZNF355P
- ZNF350
- ZNF268
- ZNF267
- ZNF229
- ZNF182
- ZNF146
- ZNF134
- ZFS-1
- DKFZp686G16228
- ZNF559
- ZSCAN32
- ZNF766
- ZNF174
- ZNF713
- ZNF74
- ZNF419
- ZNF25
- ZNF853
- ZNF812
- ZNF778
- ZNF772
- ZNF77
- ZNF701
- ZNF623
- ZNF595
- ZNF546
- ZNF480
- ZNF461
- ZNF460
- ZNF436
- ZNF426
- ZNF391
- ZNF254
- ZNF235
- ZNF233
- ZNF133
- DKFZp686B16128
- DKFZp313M0722
- HZF17
- GZF1
- ZNF483
- PRMD9
- ZNF32
- ZKSCAN2
- ZFP82
- ZNF24
- ZNF833P
- ZNF671
- ZNF561
- ZNF93
- ZNF860
- ZNF486
- ZNF431
- ZNF398
- ZNF324B
- ZNF136
- ZNF117
- ZIK1
- MZF1
- HZF28
- ZSCAN29
- ZNF28
- ZNF263
- ZNF678
- ZNF34
- ZNF160
- ZNF844
- ZSCAN23
- ZNF680
- ZNF19
- PRDM9
- ZNF73
- ZNF90
- ZNF845
- ZNF799
- ZNF79
- ZNF728
- ZNF30
- ZNF167
- ZFP90
- ZFP3
- ZSCAN21
- ZNF485
- ZNF768
- ZNF394
- ZNF793
- ZNF354B
- ZNF727
- ZNF714
- ZNF668
- ZNF607
- ZNF586
- ZNF57
- ZNF500
- ZNF454
- ZNF441
- ZNF420
- ZNF417
- ZNF285
- ZNF107
- ZFP37
- ZFP14
- DKFZp686L0787
- ZF6
- DKFZp686O1631
- ZNF10
- ZNF138
- ZNF558
- ZNF587
- ZNF66
- ZNF285A
- ZSCAN5B
- ZNF70
- ZNF80
- ZNF565
- ZNF20
- ZNF189
- ZSCAN22
- ZNF888
- ZNF732
- ZNF718
- ZNF347
- ZNF184
- ZNF154
- ZFP112
- MYNN
- MST154
- E4F1
- ZFS-3
- GLI4
- DKFZp570I0164
- A-328A3.4
- ZNF519
- ZNF213
- ZNF791
- ZNF396
- ZSCAN25
- ZNF253
- ZNF621
- ZNF197
- ZNF846
- ZNF840
- ZNF84
- ZNF761
- ZNF736
- ZNF730
- ZNF195
- ZNF181
- ZNF177
- ZKSCAN7
- DKFZp686D2168
- BCL6
- ZNF570
- ZNF578
- ZNF92
- ZNF696
- ZNF18
- ZNF141
- ZSCAN12
- ZNF691
- ZNF552
- ZNF101
- ZKSCAN5
- ZNF625
- ZNF835
- ZNF716
- ZNF584
- ZNF555
- ZNF320
- ZNF251
- ZNF17
- ZNF169
- ZNF140
- ZFP62
- OSR2
- GFI1B
- ZNF232
- ZSCAN2
- ZNF331
- ZKSCAN3
- ZNF763
- ZNF682
- ZNF649
- ZNF582
- ZNF230
- ZNF605
- ZNF577
- ZNF528
- ZNF442
- ZNF44
- ZNF333
- ZNF266
- ZNF124
- ZBTB49
- ZBTB17
- PRDM16
- FEZF1
- DKFZp686C13142
- ZFP41
- ZNF165
- ZFP64
- ZNF563
- ZNF780A
- ZNF449
- ZNF829
- ZNF823
- ZNF771
- ZNF556
- ZNF878
- ZNF76
- ZNF700
- ZNF679
- ZNF652
- ZNF619
- ZNF573
- ZNF571
- ZNF302
- ZNF275
- ZNF250
- ZFP30
- GFI1
- DKFZp547H249
- ZNF2
- ZNF587B
- ZNF200
- ZNF75CP
- ZNF491
- ZNF572
- ZKSCAN4
- ZNF770
- ZNF581
- ZNF514
- ZNF287
- ZNF202
- ZNF547
- ZNF337
- ZNF316
- ZNF236
- ZNF143
- ZBTB47
- PLAGL1
- CTCFL
- ZSCAN26
- ZNF548
- ZNF517
- ZNF669
- ZNF215
- ZNF121
- ZNF865
- ZNF837
- ZNF786
- ZNF69
- ZNF614
- ZNF498
- ZNF225
- ZFP92
- GTF3A
- ZNF497
- ZNF274
- ZNF557
- DKFZp686H10254
- ZNFN1A2
- ZNF789
- ZNF707
- ZNF670
- ZNF439
- ZNF806
- ZNF506
- ZNF432
- ZNF354C
- ZNF311
- ZNF264
- ZNF16
- DKFZp547L155
- DKFZp451F083
- ZSCAN5A
- ZNF440
- GD
- ZNF75D
- ZNF705A
- ZNF785
- ZNF222
- ZNF764
- ZNF735
- ZNF620
- ZNF470
- ZNF443
- ZNF384
- ZNF221
- PLZF
- ZNF655
- ZSCAN16
- ZNF689
- TIPUH1
- ZNF317
- ZBTB40
- RhitH
Variants for ZKSCAN1 Gene
Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZKSCAN1 Gene
| SNP ID | Clinical significance and condition | Chr 07 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs193920886 | Uncertain Significance: Malignant tumor of prostate | 100,033,959(+) | G/A | MISSENSE_VARIANT,NON_CODING_TRANSCRIPT_VARIANT,INTRON_VARIANT | |
| rs17851996 | - | p.Val26Ala |
Residual Variation Intolerance Score:
47% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
1.49;
29.03% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for ZKSCAN1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ZKSCAN1
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZKSCAN1 Gene
Disorders for ZKSCAN1 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| basaloid lung carcinoma |
|
|
| gastric cancer |
|
|
Search ZKSCAN1 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for ZKSCAN1
No data available for UniProtKB/Swiss-Prot and Genatlas for ZKSCAN1 Gene
Publications for ZKSCAN1 Gene
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 54
- Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 4 54
- Characterization of long cDNA clones from human adult spleen. II. The complete sequences of 81 cDNA clones. (PMID: 12693554) Jikuya H … Ohara O (DNA research : an international journal for rapid publication of reports on genes and genomes 2003) 3 4 54
- Isolation and fine mapping of 16 novel human zinc finger-encoding cDNAs identify putative candidate genes for developmental and malignant disorders. (PMID: 7557990) Tommerup N … Vissing H (Genomics 1995) 3 4 54
- Multiple genes encoding zinc finger domains are expressed in human T cells. (PMID: 2288909) Thiesen HJ (The New biologist 1990) 3 4 54
ExternalLinks
Products for ZKSCAN1 Gene
- Custom Antibody ServicesOriGene Antibodies for ZKSCAN1
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- OriGene qPCR primer pairs and template standards for ZKSCAN1
- OriGene CRISPR knockouts for ZKSCAN1
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- Sino Biological Human cDNA Clone for ZKSCAN1
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- Novus Biologicals proteins and lysates for ZKSCAN1
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- antibodies-online: Show 16 available ZKSCAN1 Antibodies ranked by validation data
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- antibodies-online: Show 4 available ZKSCAN1 Proteins ranked by validation data
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Sources for ZKSCAN1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) H-invDB
- (47) HORDE
- (48) HUGE
- (49) IMGT
- (50) Leiden
- (51) miRBase
- (52) DME
- (53) OriGene
- (54) PubMed
- (55) R&D Systems
- (56) TGDB
- (57) Tocris
- (58) Abcam
- (59) Novus Biologicals
- (60) ProSpec
- (61) Sino Biological
- (62) GenScript
- (63) Qiagen
- (64) OCA
- (65) Proteopedia
- (66) MOPED
- (67) neXtProt
- (68) Reactome
- (69) GeneGo (Thomson Reuters)
- (70) DISEASES
- (71) SIMAP
- (72) GenomeRNAi
- (73) LifeMap
- (74) miRTarBase
- (75) MalaCards
- (76) Invitrogen
- (77) BitterDB
- (78) ESI-BIO
- (79) RefSeq
- (80) BioSystems
- (81) MaxQB
- (82) IUPHAR
- (83) BioGPS
- (84) Illumina
- (85) COMPARTMENTS
- (86) HOMER
- (87) PaxDb
- (88)