Aliases for ZFX-AS1 Gene

Data sources for ZFX-AS1 Gene:

RNA type for ZFX-AS1 Gene

lncRNA

Aliases for ZFX-AS1 Gene

External Ids for ZFX-AS1 Gene

Previous GeneCards Identifiers for ZFX-AS1 Gene

  • GC00U933980
  • GC0XM024165

Summaries for ZFX-AS1 Gene

GeneCards Summary for ZFX-AS1 Gene

ZFX-AS1 (ZFX Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZFX-AS1 Gene

Genomics for ZFX-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ZFX-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZFX-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ZFX-AS1 Gene

Latest Assembly
chrX:24,143,572-24,149,655
(GRCh38/hg38)
Size:
6,084 bases
Orientation:
Minus strand

Previous Assembly
chrX:24,164,342-24,167,771
(GRCh37/hg19 by Entrez Gene)
Size:
3,430 bases
Orientation:
Minus strand

chrX:24,164,342-24,167,771
(GRCh37/hg19 by Ensembl)
Size:
3,430 bases
Orientation:
Minus strand

Genomic View for ZFX-AS1 Gene

Genes around ZFX-AS1 on UCSC Golden Path with GeneCards custom track
ZFX-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ZFX-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZFX-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZFX-AS1 Gene

Proteins for ZFX-AS1 Gene

Post-translational modifications for ZFX-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZFX-AS1 Gene

Domains & Families for ZFX-AS1 Gene

Gene Families for ZFX-AS1 Gene

genes like me logo Genes that share domains with ZFX-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZFX-AS1 Gene

Function for ZFX-AS1 Gene

Phenotypes From GWAS Catalog for ZFX-AS1 Gene

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZFX-AS1 Gene

Localization for ZFX-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZFX-AS1 Gene

Pathways & Interactions for ZFX-AS1 Gene

PathCards logo

SuperPathways for ZFX-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZFX-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZFX-AS1 Gene

Drugs & Compounds for ZFX-AS1 Gene

No Compound Related Data Available

Transcripts for ZFX-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ZFX-AS1 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000300AE9_9606 lncRNA 417 4

RefSeq: NR_046657,

Ensembl: ENST00000427551 (view in UCSC) ,

LNCipedia: ZFX-AS1:1,

NONCODE: NONHSAT136506.2,

URS0000D5D6B9_9606 lncRNA 3767 2

LncBook: HSALNT0280956,

LNCipedia: ZFX-AS1:3,

URS00009BAD58_9606 lncRNA 417 2

LncBook: HSALNT0280957,

NONCODE: NONHSAT223239.1,

URS0001BF8361_9606 lncRNA 3765 1

LncBook: HSALNT0280956,

URS0000D5E079_9606 lncRNA 1763 1

LNCipedia: ZFX-AS1:4,

ZFX-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ZFX-AS1 Gene

No ASD Table

Relevant External Links for ZFX-AS1 Gene

GeneLoc Exon Structure for
ZFX-AS1

No data available for mRNA/cDNA for ZFX-AS1 Gene

Expression for ZFX-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZFX-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ZFX-AS1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x5.2).

SOURCE GeneReport for Unigene cluster for ZFX-AS1 Gene:

Hs.609207
genes like me logo Genes that share expression patterns with ZFX-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZFX-AS1 Gene

Orthologs for ZFX-AS1 Gene

Evolution for ZFX-AS1 Gene

ENSEMBL:
Gene Tree for ZFX-AS1 (if available)
TreeFam:
Gene Tree for ZFX-AS1 (if available)
Alliance of Genome Resources:
Additional Orthologs for ZFX-AS1

No data available for Orthologs for ZFX-AS1 Gene

Paralogs for ZFX-AS1 Gene

No data available for Paralogs for ZFX-AS1 Gene

Variants for ZFX-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for ZFX-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for ZFX-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv504n21 CNV gain 19592680
nsv1076250 CNV deletion 25765185
nsv1145288 CNV deletion 24896259
nsv524256 CNV gain 19592680
nsv818019 CNV gain 17921354

Additional Variant Information for ZFX-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZFX-AS1
Leiden Open Variation Database (LOVD)
ZFX-AS1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for ZFX-AS1 Gene

Disorders for ZFX-AS1 Gene

Additional Disease Information for ZFX-AS1

No disorders were found for ZFX-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZFX-AS1 Gene

Publications for ZFX-AS1 Gene

No publications were found for ZFX-AS1 Gene.

Products for ZFX-AS1 Gene

Sources for ZFX-AS1 Gene