Aliases for ZFP92 Gene

Aliases for ZFP92 Gene

  • ZFP92 Zinc Finger Protein 2 3 5
  • Zinc Finger Protein Homologous To Zfp92 In Mouse 2 3
  • Zinc Finger Protein 92 Homolog 3 4
  • ZNF897 2 3
  • Zfp-92 3 4
  • Zinc Finger Protein 92 Homolog (Mouse) 2
  • ZFP92 5

External Ids for ZFP92 Gene

Previous GeneCards Identifiers for ZFP92 Gene

  • GC0XU990301
  • GC0XP152337
  • GC0XP152683
  • GC0XP141343

Summaries for ZFP92 Gene

GeneCards Summary for ZFP92 Gene

ZFP92 (ZFP92 Zinc Finger Protein) is a Protein Coding gene. Among its related pathways are Herpes simplex virus 1 infection. Gene Ontology (GO) annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF107.

UniProtKB/Swiss-Prot Summary for ZFP92 Gene

Additional gene information for ZFP92 Gene

No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZFP92 Gene

Genomics for ZFP92 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ZFP92 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ153410 Promoter/Enhancer 1.1 ENCODE CraniofacialAtlas 600.7 -0.2 -224 0.6 ZNF143 NR2C1 ZNF740 EZH2 NRF1 ZNF766 POLR2A NR2C2 GABPA MYC HSALNG0140752 ZFP92 PNMA6E RF00017-8799 RN7SL667P lnc-PNMA6E-2 ZNF275
GH0XJ153409 Enhancer 0.7 Ensembl 600.7 -1.6 -1560 0.2 GATAD2A SOX13 ZBTB26 FOXA2 TFDP1 KDM6A SAP130 GABPB1 SMAD4 HNF4A HSALNG0140752 ZFP92 ZNF275 PNMA6E RF00017-8799 RN7SL667P lnc-PNMA6E-2
GH0XJ153493 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 5.3 +84.9 84860 5.4 ZIC2 POLR2A REST ZNF341 NRF1 CTCF CEBPB RAD21 ZNF335 PRDM4 HAUS7 BGN lnc-ATP2B3-2 ZFP92 TREX2 NONHSAG055547.2 ATP2B3
GH0XJ153379 Enhancer 1.4 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.3 -30.4 -30360 3.4 CREB1 RFX1 JUND ZIC2 PKNOX1 REST HDAC1 ZNF311 FOXJ2 EP300 ZNF275 HCFC1 piR-39227-005 LOC105373379 ZFP92
GH0XJ153408 Enhancer 0.5 Ensembl 0.7 -3.3 -3260 0.4 MGA E2F5 BHLHE40 ZNF589 IKZF1 RAD51 USF2 L3MBTL2 RF00017-8799 ZFP92 RN7SL667P lnc-PNMA6E-2 PNMA6E ZNF275
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZFP92 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for ZFP92

Top Transcription factor binding sites by QIAGEN in the ZFP92 gene promoter:
  • AhR
  • AP-4
  • Arnt
  • CUTL1
  • HNF-4alpha1
  • Ik-1
  • Pax-3
  • Pax-6
  • POU3F2 (N-Oct-5b)
  • YY1

Genomic Locations for ZFP92 Gene

Genomic Locations for ZFP92 Gene
chrX:153,411,461-153,426,481
(GRCh38/hg38)
Size:
15,021 bases
Orientation:
Plus strand
chrX:152,683,780-152,687,087
(GRCh37/hg19)
Size:
3,308 bases
Orientation:
Plus strand

Genomic View for ZFP92 Gene

Genes around ZFP92 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZFP92 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZFP92 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZFP92 Gene

Proteins for ZFP92 Gene

  • Protein details for ZFP92 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NM28-ZFP92_HUMAN
    Recommended name:
    Zinc finger protein 92 homolog
    Protein Accession:
    A6NM28

    Protein attributes for ZFP92 Gene

    Size:
    416 amino acids
    Molecular mass:
    45791 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZFP92 Gene

Post-translational modifications for ZFP92 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZFP92 Gene

No data available for DME Specific Peptides for ZFP92 Gene

Domains & Families for ZFP92 Gene

Gene Families for ZFP92 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins
  • Transcription factors

Protein Domains for ZFP92 Gene

Suggested Antigen Peptide Sequences for ZFP92 Gene

GenScript: Design optimal peptide antigens:
  • Zinc finger protein 92 homolog (ZFP92_HUMAN)

Graphical View of Domain Structure for InterPro Entry

A6NM28

UniProtKB/Swiss-Prot:

ZFP92_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZFP92: view

Function for ZFP92 Gene

Molecular function for ZFP92 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.
GENATLAS Biochemistry:
zinc finger protein 92 (C2H2 type,Kruppel-like)

Phenotypes From GWAS Catalog for ZFP92 Gene

Gene Ontology (GO) - Molecular Function for ZFP92 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZFP92: view
genes like me logo Genes that share phenotypes with ZFP92: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZFP92

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZFP92 Gene

Localization for ZFP92 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZFP92 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZFP92 gene
Compartment Confidence
nucleus 3

Gene Ontology (GO) - Cellular Components for ZFP92 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZFP92: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for ZFP92 Gene

Pathways & Interactions for ZFP92 Gene

PathCards logo

SuperPathways for ZFP92 Gene

genes like me logo Genes that share pathways with ZFP92: view

Pathways by source for ZFP92 Gene

1 KEGG pathway for ZFP92 Gene

Interacting Proteins for ZFP92 Gene

Gene Ontology (GO) - Biological Process for ZFP92 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZFP92: view

No data available for SIGNOR curated interactions for ZFP92 Gene

Drugs & Compounds for ZFP92 Gene

No Compound Related Data Available

Transcripts for ZFP92 Gene

mRNA/cDNA for ZFP92 Gene

1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZFP92

Alternative Splicing Database (ASD) splice patterns (SP) for ZFP92 Gene

No ASD Table

Relevant External Links for ZFP92 Gene

GeneLoc Exon Structure for
ZFP92

Expression for ZFP92 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZFP92 Gene

Protein differential expression in normal tissues from HIPED for ZFP92 Gene

This gene is overexpressed in Platelet (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZFP92 Gene



Protein tissue co-expression partners for ZFP92 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZFP92

SOURCE GeneReport for Unigene cluster for ZFP92 Gene:

Hs.534554
genes like me logo Genes that share expression patterns with ZFP92: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZFP92 Gene

Orthologs for ZFP92 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ZFP92 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia ZFP92 30
  • 92.83 (n)
-- 31
  • 41 (a)
ManyToMany
Dog
(Canis familiaris)
Mammalia ZFP92 30
  • 79.47 (n)
-- 31
  • 37 (a)
ManyToMany
Rat
(Rattus norvegicus)
Mammalia RGD1559446 30
  • 77.3 (n)
Mouse
(Mus musculus)
Mammalia Zfp92 30 17 31
  • 76.03 (n)
OneToOne
Platypus
(Ornithorhynchus anatinus)
Mammalia -- 31
  • 35 (a)
OneToMany
Oppossum
(Monodelphis domestica)
Mammalia -- 31
  • 28 (a)
ManyToMany
Chicken
(Gallus gallus)
Aves -- 31
  • 38 (a)
ManyToMany
-- 31
  • 34 (a)
ManyToMany
-- 31
  • 33 (a)
ManyToMany
-- 31
  • 31 (a)
ManyToMany
-- 31
  • 31 (a)
ManyToMany
-- 31
  • 30 (a)
ManyToMany
Baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes ZAP1 31
  • 11 (a)
OneToMany
Species where no ortholog for ZFP92 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for ZFP92 Gene

ENSEMBL:
Gene Tree for ZFP92 (if available)
TreeFam:
Gene Tree for ZFP92 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for ZFP92: view image

Paralogs for ZFP92 Gene

(461) SIMAP similar genes for ZFP92 Gene using alignment to 1 proteins:

  • ZFP92_HUMAN
genes like me logo Genes that share paralogs with ZFP92: view

Variants for ZFP92 Gene

Additional dbSNP identifiers (rs#s) for ZFP92 Gene

Structural Variations from Database of Genomic Variants (DGV) for ZFP92 Gene

Variant ID Type Subtype PubMed ID
esv33199 CNV gain+loss 17666407

Variation tolerance for ZFP92 Gene

Gene Damage Index Score: 1.17; 23.67% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ZFP92 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZFP92

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZFP92 Gene

Disorders for ZFP92 Gene

Additional Disease Information for ZFP92

No disorders were found for ZFP92 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZFP92 Gene

Publications for ZFP92 Gene

  1. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 41
  2. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross MT … Bentley DR (Nature 2005) 4
  3. Comparative genome sequence analysis of the Bpa/Str region in mouse and Man. (PMID: 10854409) Mallon AM … Brown SD (Genome research 2000) 3
  4. Expressed STSs and transcription of human Xq28. (PMID: 9099879) Esposito T … D'Esposito M (Gene 1997) 3

Products for ZFP92 Gene

Sources for ZFP92 Gene