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Aliases for ZDHHC8P1 Gene

Aliases for ZDHHC8P1 Gene

  • Zinc Finger DHHC-Type Containing 8 Pseudogene 1 2 3 5
  • Zinc Finger, DHHC-Type Containing 8 Pseudogene 2 3
  • ZDHHC8P 3

External Ids for ZDHHC8P1 Gene

Previous HGNC Symbols for ZDHHC8P1 Gene

  • ZDHHC8P

Previous GeneCards Identifiers for ZDHHC8P1 Gene

  • GC22M023734
  • GC22M006700

Summaries for ZDHHC8P1 Gene

GeneCards Summary for ZDHHC8P1 Gene

ZDHHC8P1 (Zinc Finger DHHC-Type Containing 8 Pseudogene 1) is a Pseudogene.

Additional gene information for ZDHHC8P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZDHHC8P1 Gene

Genomics for ZDHHC8P1 Gene

GeneHancer (GH) Regulatory Elements for ZDHHC8P1 Gene

Promoters and enhancers for ZDHHC8P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J023400 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 646.9 +0.7 692 2.8 CTCF ZFX SP5 GLIS2 ZBTB8A PRDM10 ZIC2 REST ZNF740 PATZ1 ZDHHC8P1 ENSG00000248409
GH22J024008 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 27.8 -608.1 -608083 5.6 ZNF652 ZFX SP1 ELF3 ZKSCAN8 MNT CBFA2T2 ZNF148 NKRF POLR2A CABIN1 ENSG00000272973 ZDHHC8P1 MIF-AS1 SNRPD3 SUSD2 RN7SL268P GNAZ ZNF70 GSTT2
GH22J023404 Enhancer 0.8 ENCODE 47.4 -2.1 -2123 0.2 ELF3 AHR TFE3 PPARG ZNF644 KAT8 REST RXRB ZNF692 IRF2 ZDHHC8P1 ENSG00000248409 LINC01659
GH22J023892 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.9 -492.5 -492463 4.7 HDGF SP1 ZFX CTCF ELF3 MNT ZNF148 NKRF POLR2A CEBPG GC22M027003 GC22M027006 GC22M027009 GC22M027046 PIR32728 PIR33169 PIR50058 PIR56395 PIR61500 PIR40684
GH22J024242 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 11 -842.5 -842502 6.1 ZNF652 CC2D1A CTCF GTF2F1 ZNF687 NFIB MLLT1 RAD21 EGR1 KAT8 GGT5 ENSG00000272578 POM121L9P CABIN1 ZNF70 SMARCB1 ENSG00000272973 SPECC1L SNRPD3 MIF-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZDHHC8P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZDHHC8P1 Gene

Genomic Locations for ZDHHC8P1 Gene
chr22:23,390,605-23,402,726
(GRCh38/hg38)
Size:
12,122 bases
Orientation:
Minus strand
chr22:23,732,792-23,744,913
(GRCh37/hg19)
Size:
12,122 bases
Orientation:
Minus strand

Genomic View for ZDHHC8P1 Gene

Genes around ZDHHC8P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZDHHC8P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZDHHC8P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZDHHC8P1 Gene

Function for ZDHHC8P1 Gene

Phenotypes From GWAS Catalog for ZDHHC8P1 Gene

genes like me logo Genes that share phenotypes with ZDHHC8P1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZDHHC8P1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZDHHC8P1 Gene

Localization for ZDHHC8P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZDHHC8P1 Gene

Pathways & Interactions for ZDHHC8P1 Gene

PathCards logo

SuperPathways for ZDHHC8P1 Gene

No Data Available

Interacting Proteins for ZDHHC8P1 Gene

Gene Ontology (GO) - Biological Process for ZDHHC8P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZDHHC8P1 Gene

Drugs & Compounds for ZDHHC8P1 Gene

No Compound Related Data Available

Transcripts for ZDHHC8P1 Gene

mRNA/cDNA for ZDHHC8P1 Gene

Unigene Clusters for ZDHHC8P1 Gene

Zinc finger, DHHC-type containing 8 pseudogene 1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZDHHC8P1

Alternative Splicing Database (ASD) splice patterns (SP) for ZDHHC8P1 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7
SP1: - -
SP2: - - -
SP3:
SP4: - -

Relevant External Links for ZDHHC8P1 Gene

GeneLoc Exon Structure for
ZDHHC8P1
ECgene alternative splicing isoforms for
ZDHHC8P1

Expression for ZDHHC8P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZDHHC8P1 Gene

mRNA differential expression in normal tissues according to GTEx for ZDHHC8P1 Gene

This gene is overexpressed in Ovary (x11.0) and Prostate (x5.0).

NURSA nuclear receptor signaling pathways regulating expression of ZDHHC8P1 Gene:

ZDHHC8P1

SOURCE GeneReport for Unigene cluster for ZDHHC8P1 Gene:

Hs.386693
genes like me logo Genes that share expression patterns with ZDHHC8P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZDHHC8P1 Gene

Orthologs for ZDHHC8P1 Gene

Evolution for ZDHHC8P1 Gene

ENSEMBL:
Gene Tree for ZDHHC8P1 (if available)
TreeFam:
Gene Tree for ZDHHC8P1 (if available)

No data available for Orthologs for ZDHHC8P1 Gene

Paralogs for ZDHHC8P1 Gene

No data available for Paralogs for ZDHHC8P1 Gene

Variants for ZDHHC8P1 Gene

Sequence variations from dbSNP and Humsavar for ZDHHC8P1 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000229526 -- 23,393,148(-) T/C intron_variant
rs1000262337 -- 23,392,952(-) G/A intron_variant
rs1000325996 -- 23,402,407(-) G/C non_coding_transcript_variant
rs1000414666 -- 23,396,931(-) T/C intron_variant
rs1000712856 -- 23,401,816(-) T/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ZDHHC8P1 Gene

Variant ID Type Subtype PubMed ID
dgv4528n100 CNV gain 25217958
dgv8039n54 CNV gain 21841781
esv2724041 CNV deletion 23290073
esv2762117 CNV gain 21179565
esv3575443 CNV gain 25503493
esv3893457 CNV gain 25118596
nsv1057910 CNV gain 25217958
nsv1059951 CNV gain 25217958
nsv1066891 CNV gain 25217958
nsv469702 CNV gain 16826518
nsv522451 CNV loss 19592680
nsv526567 CNV gain 19592680
nsv588601 CNV gain 21841781
nsv7350 OTHER inversion 18451855
nsv829099 CNV gain 20364138
nsv9876 CNV gain+loss 18304495

Additional Variant Information for ZDHHC8P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZDHHC8P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZDHHC8P1 Gene

Disorders for ZDHHC8P1 Gene

Additional Disease Information for ZDHHC8P1

No disorders were found for ZDHHC8P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZDHHC8P1 Gene

Publications for ZDHHC8P1 Gene

  1. Genome-wide association study of lung function decline in adults with and without asthma. (PMID: 22424883) Imboden M … Probst-Hensch NM (The Journal of allergy and clinical immunology 2012) 45 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  3. Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PMID: 17052657) Fung HC … Singleton A (The Lancet. Neurology 2006) 45 58
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  5. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3 58

Products for ZDHHC8P1 Gene

Sources for ZDHHC8P1 Gene

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