Aliases for ZDHHC8P1 Gene

Aliases for ZDHHC8P1 Gene

  • ZDHHC8 Pseudogene 1 2 3
  • Zinc Finger DHHC-Type Containing 8 Pseudogene 1 2 3 5
  • Zinc Finger, DHHC-Type Containing 8 Pseudogene 2 3
  • ZDHHC8P 3

External Ids for ZDHHC8P1 Gene

Previous HGNC Symbols for ZDHHC8P1 Gene

  • ZDHHC8P

Previous GeneCards Identifiers for ZDHHC8P1 Gene

  • GC22M023734
  • GC22M006700

Summaries for ZDHHC8P1 Gene

GeneCards Summary for ZDHHC8P1 Gene

ZDHHC8P1 (ZDHHC8 Pseudogene 1) is a Pseudogene.

Additional gene information for ZDHHC8P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZDHHC8P1 Gene

Genomics for ZDHHC8P1 Gene

GeneHancer (GH) Regulatory Elements for ZDHHC8P1 Gene

Promoters and enhancers for ZDHHC8P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J023400 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 546.9 +0.7 692 2.8 CTCF NRF1 ZNF10 ZIC2 REST GABPA ZBTB26 ZNF740 CTBP1 SMC3 ZDHHC8P1 lnc-IGLL1-4 ENSG00000248409
GH22J024008 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 27.8 -608.1 -608083 5.6 FOXK2 EP300 TCF12 SIN3A NRF1 POLR2G USF1 SP1 PHF8 FOS CABIN1 ENSG00000272973 ZDHHC8P1 MIF-AS1 SNRPD3 SUSD2 RN7SL268P GNAZ ZNF70 GSTT2
GH22J022507 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 20.9 +894.2 894225 1.8 ZBTB40 EP300 CTCF POLR2G PHF8 ZBTB10 ZBTB26 ZBTB25 TSC22D4 SKI ZNF280B piR-35312-023 piR-30791-063 piR-30876-072 ZDHHC8P1 GNAZ ENSG00000224086 ENSG00000273342 IGLV5-37 piR-57133-384
GH22J023404 Enhancer 0.8 ENCODE 47.5 -2.1 -2123 0.2 REST ZBTB25 TGIF2 ZBTB7A ZBTB26 HDAC2 ZSCAN9 KMT2B KLF9 SAP130 ZDHHC8P1 ENSG00000248409 RF00994-615
GH22J023405 Enhancer 0.8 Ensembl 47.5 -2.4 -2375 0.2 ZBTB25 TGIF2 REST ZBTB26 HDAC2 ZSCAN9 KMT2B KLF9 POLR2A MXD4 ZDHHC8P1 RF00994-615
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZDHHC8P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZDHHC8P1 Gene

Genomic Locations for ZDHHC8P1 Gene
chr22:23,390,605-23,402,726
(GRCh38/hg38)
Size:
12,122 bases
Orientation:
Minus strand
chr22:23,732,792-23,744,913
(GRCh37/hg19)
Size:
12,122 bases
Orientation:
Minus strand

Genomic View for ZDHHC8P1 Gene

Genes around ZDHHC8P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZDHHC8P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZDHHC8P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZDHHC8P1 Gene

Proteins for ZDHHC8P1 Gene

Post-translational modifications for ZDHHC8P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZDHHC8P1 Gene

Domains & Families for ZDHHC8P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZDHHC8P1 Gene

Function for ZDHHC8P1 Gene

Phenotypes From GWAS Catalog for ZDHHC8P1 Gene

genes like me logo Genes that share phenotypes with ZDHHC8P1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZDHHC8P1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZDHHC8P1 Gene

Localization for ZDHHC8P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZDHHC8P1 Gene

Pathways & Interactions for ZDHHC8P1 Gene

PathCards logo

SuperPathways for ZDHHC8P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ZDHHC8P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZDHHC8P1 Gene

Drugs & Compounds for ZDHHC8P1 Gene

No Compound Related Data Available

Transcripts for ZDHHC8P1 Gene

mRNA/cDNA for ZDHHC8P1 Gene

1 REFSEQ mRNAs :
11 NCBI additional mRNA sequence :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZDHHC8P1

Alternative Splicing Database (ASD) splice patterns (SP) for ZDHHC8P1 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7
SP1: - -
SP2: - - -
SP3:
SP4: - -

Relevant External Links for ZDHHC8P1 Gene

GeneLoc Exon Structure for
ZDHHC8P1

Expression for ZDHHC8P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZDHHC8P1 Gene

mRNA differential expression in normal tissues according to GTEx for ZDHHC8P1 Gene

This gene is overexpressed in Ovary (x11.0) and Prostate (x5.0).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZDHHC8P1

SOURCE GeneReport for Unigene cluster for ZDHHC8P1 Gene:

Hs.386693
genes like me logo Genes that share expression patterns with ZDHHC8P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZDHHC8P1 Gene

Orthologs for ZDHHC8P1 Gene

Evolution for ZDHHC8P1 Gene

ENSEMBL:
Gene Tree for ZDHHC8P1 (if available)
TreeFam:
Gene Tree for ZDHHC8P1 (if available)

No data available for Orthologs for ZDHHC8P1 Gene

Paralogs for ZDHHC8P1 Gene

No data available for Paralogs for ZDHHC8P1 Gene

Variants for ZDHHC8P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for ZDHHC8P1 Gene

Variant ID Type Subtype PubMed ID
dgv4528n100 CNV gain 25217958
dgv8039n54 CNV gain 21841781
esv2724041 CNV deletion 23290073
esv2762117 CNV gain 21179565
esv3575443 CNV gain 25503493
esv3893457 CNV gain 25118596
nsv1057910 CNV gain 25217958
nsv1059951 CNV gain 25217958
nsv1066891 CNV gain 25217958
nsv469702 CNV gain 16826518
nsv522451 CNV loss 19592680
nsv526567 CNV gain 19592680
nsv588601 CNV gain 21841781
nsv7350 OTHER inversion 18451855
nsv829099 CNV gain 20364138
nsv9876 CNV gain+loss 18304495

Additional Variant Information for ZDHHC8P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZDHHC8P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for ZDHHC8P1 Gene

Disorders for ZDHHC8P1 Gene

Additional Disease Information for ZDHHC8P1

No disorders were found for ZDHHC8P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZDHHC8P1 Gene

Publications for ZDHHC8P1 Gene

  1. Genome-wide association study of lung function decline in adults with and without asthma. (PMID: 22424883) Imboden M … Probst-Hensch NM (The Journal of allergy and clinical immunology 2012) 41 54
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54
  3. Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PMID: 17052657) Fung HC … Singleton A (The Lancet. Neurology 2006) 41 54
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54
  5. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3 54

Products for ZDHHC8P1 Gene

Sources for ZDHHC8P1 Gene