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Aliases for ZC3H18-AS1 Gene
Subcategory (RNA class) for ZC3H18-AS1 Gene
lncRNA
Number of RNA Genes sources:
2 / 17
Aliases for ZC3H18-AS1 Gene
Previous HGNC Symbols for ZC3H18-AS1 Gene
- C16orf85
- LINC00859
Previous GeneCards Identifiers for ZC3H18-AS1 Gene
- GC16U901687
Summaries for ZC3H18-AS1 Gene
GeneCards Summary for ZC3H18-AS1 Gene
ZC3H18-AS1 (ZC3H18 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for ZC3H18-AS1 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZC3H18-AS1 Gene
Genomics for ZC3H18-AS1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ZC3H18-AS1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH16J088569 | Promoter/Enhancer | 2 | EPDnew Ensembl ENCODE CraniofacialAtlas | 600.7 | -0.4 | -425 | 2.8 | SP1 CREB1 ZNF629 TFE3 SIX5 LEF1 NFKBIZ POLR2A ZNF692 BACH1 | ZC3H18 ZC3H18-AS1 lnc-CYBA-4 piR-37138 IL17C HSALNG0113518 | |
| GH16J088566 | Enhancer | 0.8 | Ensembl ENCODE | 0.7 | +3.9 | 3875 | 1 | RFX1 FOXA1 PKNOX1 KLF9 EGR1 BMI1 ZFHX2 GATA3 ZNF384 KLF10 | lnc-ZC3H18-1 CYBA ZC3H18 ZC3H18-AS1 lnc-CYBA-4 RF00017-2191 ZFPM1 | |
| GH16J088559 | Enhancer | 1 | Ensembl ENCODE | 0.4 | +11.0 | 10976 | 1.2 | CTCF REST PKNOX1 RXRB SP1 HDAC1 ETS1 MTA3 SMARCA5 CTBP1 | ENSG00000260671 IL17C lnc-ZC3H18-1 ZC3H18 ZC3H18-AS1 lnc-CYBA-4 RF00017-2191 ZFPM1 | |
| GH16J088561 | Enhancer | 0.7 | ENCODE | 0.4 | +8.0 | 8048 | 0.2 | CTCF REST RAD21 ZNF740 ZNF600 CBX3 ZNF444 CHD2 SMC3 ZBTB25 | lnc-ZC3H18-1 ZC3H18 ZC3H18-AS1 lnc-CYBA-4 RF00017-2191 ZFPM1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ZC3H18-AS1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for ZC3H18-AS1 Gene
Genomic Locations for ZC3H18-AS1 Gene
- chr16:88,559,558-88,570,176
- (GRCh38/hg38)
- Size:
- 10,619 bases
- Orientation:
- Minus strand
Genomic View for ZC3H18-AS1 Gene
Genes around ZC3H18-AS1 on UCSC Golden Path with GeneCards custom track
ZC3H18-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 16q24.2 by HGNC
- 16q24.2 by Entrez Gene
ZC3H18-AS1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ZC3H18-AS1 Gene
Proteins for ZC3H18-AS1 Gene
Protein Expression for ZC3H18-AS1 Gene
Post-translational modifications for ZC3H18-AS1 Gene
No Post-translational modifications
Antibody Products
- Novus Biologicals Antibodies for ZC3H18-AS1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ZC3H18-AS1
- Origene Custom Protein Services for ZC3H18-AS1
No data available for DME Specific Peptides for ZC3H18-AS1 Gene
Domains & Families for ZC3H18-AS1 Gene
Gene Families for ZC3H18-AS1 Gene
- HGNC:
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZC3H18-AS1 Gene
Function for ZC3H18-AS1 Gene
Phenotypes for ZC3H18-AS1 Gene
- GenomeRNAi human phenotypes for ZC3H18-AS1:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZC3H18-AS1 - Select products 50% OFF >
- * ZC3H18-AS1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for ZC3H18-AS1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZC3H18-AS1
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZC3H18-AS1
- Browse OriGene Inhibitory RNA Products For ZC3H18-AS1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZC3H18-AS1
Clone Products
- Applied Biological Materials (abm): Clones for ZC3H18-AS1 - Select products 50% OFF >
- * ZC3H18-AS1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZC3H18-AS1
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZC3H18-AS1 Gene
Localization for ZC3H18-AS1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZC3H18-AS1 Gene
Transcripts for ZC3H18-AS1 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for ZC3H18-AS1 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS0000BC44B2_9606 | lncRNA | 1224 | 2 |
HGNC: 33799, RefSeq: NR_146877, |
| URS00008B3955_9606 | lncRNA | 316 | 2 |
LNCipedia: lnc-CYBA-4:4, NONCODE: NONHSAT144386.2, |
| URS0000D577BC_9606 | lncRNA | 4953 | 1 |
LNCipedia: lnc-CYBA-4:3, |
ZC3H18-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for ZC3H18-AS1 Gene
- 1 REFSEQ mRNAs :
- 1 NCBI additional mRNA sequence :
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZC3H18-AS1 - Select products 50% OFF >
- * ZC3H18-AS1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for ZC3H18-AS1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZC3H18-AS1
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZC3H18-AS1
- Browse OriGene Inhibitory RNA Products For ZC3H18-AS1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZC3H18-AS1
Clone Products
- Applied Biological Materials (abm): Clones for ZC3H18-AS1 - Select products 50% OFF >
- * ZC3H18-AS1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZC3H18-AS1
Relevant External Links for ZC3H18-AS1 Gene
- GeneLoc Exon Structure for
- ZC3H18-AS1
Expression for ZC3H18-AS1 Gene
This gene is overexpressed in Plasma (69.0).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZC3H18-AS1
Primer Products
-
OriGene qPCR primer pairs for ZC3H18-AS1
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZC3H18-AS1 Gene
Orthologs for ZC3H18-AS1 Gene
No data available for Orthologs and Evolution for ZC3H18-AS1 Gene
Paralogs for ZC3H18-AS1 Gene
No data available for Paralogs for ZC3H18-AS1 Gene
Variants for ZC3H18-AS1 Gene
Additional Variant Information for ZC3H18-AS1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ZC3H18-AS1
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZC3H18-AS1 Gene
Disorders for ZC3H18-AS1 Gene
Additional Disease Information for ZC3H18-AS1
No disorders were found for ZC3H18-AS1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZC3H18-AS1 Gene
Publications for ZC3H18-AS1 Gene
No publications were found for ZC3H18-AS1 Gene.
Products for ZC3H18-AS1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ZC3H18-AS1
- Origene Custom Protein Services for ZC3H18-AS1
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZC3H18-AS1
- Browse OriGene Inhibitory RNA Products For ZC3H18-AS1
- OriGene qPCR primer pairs for ZC3H18-AS1
- Browse CRISPR knockouts for ZC3H18-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ZC3H18-AS1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Novus Biologicals Antibodies for ZC3H18-AS1
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
- Browse ELISA Kits
- VectorBuilder Custom and pre-made DNA vectors for ZC3H18-AS1 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for ZC3H18-AS1 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for ZC3H18-AS1 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for ZC3H18-AS1 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for ZC3H18-AS1
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZC3H18-AS1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZC3H18-AS1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ZC3H18-AS1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZC3H18-AS1
Sources for ZC3H18-AS1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB