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ZC3H11A (Zinc Finger CCCH-Type Containing 11A) is a Protein Coding gene. Among its related pathways are Transport of Mature Transcript to Cytoplasm and Cleavage of Growing Transcript in the Termination Region. An important paralog of this gene is ZC3H11B.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0003723 | RNA binding | HDA | 22658674 |
GO:0003729 | mRNA binding | IBA | 21873635 |
GO:0005515 | protein binding | IPI | 16189514 |
GO:0046872 | metal ion binding | IEA | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000346 | colocalizes_with transcription export complex | IDA | 22928037 |
GO:0005654 | nucleoplasm | TAS | -- |
SuperPathway | Contained pathways | ||
---|---|---|---|
1 | Cleavage of Growing Transcript in the Termination Region | ||
2 | Transport of Mature Transcript to Cytoplasm | ||
3 | Gene Expression |
.48
|
|
4 | mRNA Splicing - Major Pathway | ||
5 | Tat-mediated elongation of the HIV-1 transcript |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0006405 | RNA export from nucleus | TAS | -- |
GO:0006406 | mRNA export from nucleus | TAS | -- |
GO:0016973 | poly(A)+ mRNA export from nucleus | IBA,IMP | 22928037 |
GO:0031124 | mRNA 3'-end processing | TAS | -- |
GO:0051028 | mRNA transport | IEA | -- |
This gene was present in the common ancestor of chordates.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
chimpanzee (Pan troglodytes) |
Mammalia | ZC3H11A 33 32 |
|
OneToOne | |
dog (Canis familiaris) |
Mammalia | ZC3H11A 33 32 |
|
OneToOne | |
cow (Bos Taurus) |
Mammalia | ZC3H11A 33 32 |
|
OneToOne | |
mouse (Mus musculus) |
Mammalia | Zc3h11a 17 33 32 |
|
||
rat (Rattus norvegicus) |
Mammalia | Zc3h11a 32 |
|
||
oppossum (Monodelphis domestica) |
Mammalia | ZC3H11A 33 |
|
OneToOne | |
platypus (Ornithorhynchus anatinus) |
Mammalia | ZC3H11A 33 |
|
OneToOne | |
chicken (Gallus gallus) |
Aves | ZC3H11A 33 32 |
|
OneToOne | |
lizard (Anolis carolinensis) |
Reptilia | -- 33 |
|
OneToMany | |
-- 33 |
|
OneToMany | |||
tropical clawed frog (Silurana tropicalis) |
Amphibia | zc3h11a 32 |
|
||
Str.17290 32 |
|
||||
African clawed frog (Xenopus laevis) |
Amphibia | Xl.6811 32 |
|
||
zebrafish (Danio rerio) |
Actinopterygii | zc3h11a 33 32 |
|
OneToOne | |
wufc32e10 32 |
|
SNP ID | Clin | Chr 01 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs1000050843 | -- | 203,840,605(+) | A/T | intron_variant | |
rs1000067608 | -- | 203,834,155(+) | C/T | intron_variant | |
rs1000116443 | -- | 203,852,625(+) | G/A | 3_prime_UTR_variant | |
rs1000116729 | -- | 203,818,780(+) | T/A | intron_variant | |
rs1000181035 | -- | 203,811,834(+) | T/C | intron_variant |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv1633923 | CNV | insertion | 17803354 |
esv2658459 | CNV | deletion | 23128226 |
esv2678729 | CNV | deletion | 23128226 |
esv3545400 | CNV | deletion | 23714750 |
esv3588602 | CNV | loss | 21293372 |
esv3588603 | CNV | loss | 21293372 |
esv3588604 | CNV | loss | 21293372 |
nsv1113213 | CNV | deletion | 24896259 |
nsv520482 | CNV | loss | 19592680 |
nsv522989 | CNV | loss | 19592680 |
nsv946595 | CNV | duplication | 23825009 |
nsv946596 | CNV | duplication | 23825009 |
nsv946597 | CNV | duplication | 23825009 |
nsv946598 | CNV | duplication | 23825009 |
nsv946599 | CNV | duplication | 23825009 |
No disorders were found for ZC3H11A Gene.