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Aliases for ZBTB11-AS1 Gene

Subcategory (RNA class) for ZBTB11-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ZBTB11-AS1 Gene

  • ZBTB11 Antisense RNA 1 2 3 5

External Ids for ZBTB11-AS1 Gene

ORGUL Members for ZBTB11-AS1 Gene

Previous GeneCards Identifiers for ZBTB11-AS1 Gene

  • GC03P101397

Summaries for ZBTB11-AS1 Gene

GeneCards Summary for ZBTB11-AS1 Gene

ZBTB11-AS1 (ZBTB11 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for ZBTB11-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZBTB11-AS1 Gene

Genomics for ZBTB11-AS1 Gene

GeneHancer (GH) Regulatory Elements for ZBTB11-AS1 Gene

Promoters and enhancers for ZBTB11-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I101674 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 556.1 +0.3 290 3.7 HDGF FOXA2 PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 YY1 E2F8 ZBTB11 ZBTB11-AS1 NXPE3 SENP7 CEP97
GH03I101683 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE 42.6 +9.4 9374 5.2 PKNOX1 SMAD1 ARNT ARID4B NEUROD1 SIN3A FEZF1 DMAP1 ZNF2 YY1 RPL24 GC03P101686 LOC105374013 ZBTB11-AS1 SENP7 RPS18P5 ZNF90P1 ZBTB11 TFG PDCL3P4
GH03I101723 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 21.6 +48.9 48864 3 PKNOX1 ATF1 ARNT ARID4B SIN3A FEZF1 DMAP1 YY1 NCOA2 ETS1 CEP97 ZBTB11-AS1 NXPE3 ZNF90P1
GH03I101643 Enhancer 1.3 Ensembl ENCODE dbSUPER 24.3 -32.3 -32279 1.8 ATF1 ZBTB40 ZNF766 CAVIN1 ZBTB2 ZBTB11 USF2 ZEB2 HDAC8 ZNF592 ZBTB11-AS1 RPL24 NXPE3 SENP7 TFG PDCL3P4 GC03P101648 PIR36650
GH03I101572 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.5 -102.0 -102018 3.4 HDGF PKNOX1 CLOCK FOXA2 SMAD1 ARID4B NEUROD1 SIN3A DMAP1 ZNF2 PCNP NXPE3 SENP7 ZBTB11-AS1 RPS18P5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZBTB11-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZBTB11-AS1 Gene

Genomic Locations for ZBTB11-AS1 Gene
chr3:101,676,430-101,679,217
(GRCh38/hg38)
Size:
2,788 bases
Orientation:
Plus strand
chr3:101,395,274-101,398,061
(GRCh37/hg19)

Genomic View for ZBTB11-AS1 Gene

Genes around ZBTB11-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZBTB11-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZBTB11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZBTB11-AS1 Gene

Proteins for ZBTB11-AS1 Gene

Post-translational modifications for ZBTB11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZBTB11-AS1 Gene

Domains & Families for ZBTB11-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZBTB11-AS1 Gene

Function for ZBTB11-AS1 Gene

Phenotypes From GWAS Catalog for ZBTB11-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZBTB11-AS1 Gene

Localization for ZBTB11-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZBTB11-AS1 Gene

Pathways & Interactions for ZBTB11-AS1 Gene

SuperPathways for ZBTB11-AS1 Gene

No Data Available

Interacting Proteins for ZBTB11-AS1 Gene

Gene Ontology (GO) - Biological Process for ZBTB11-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZBTB11-AS1 Gene

Drugs & Compounds for ZBTB11-AS1 Gene

No Compound Related Data Available

Transcripts for ZBTB11-AS1 Gene

mRNA/cDNA for ZBTB11-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZBTB11-AS1 Gene

No ASD Table

Relevant External Links for ZBTB11-AS1 Gene

GeneLoc Exon Structure for
ZBTB11-AS1
ECgene alternative splicing isoforms for
ZBTB11-AS1

Expression for ZBTB11-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZBTB11-AS1 Gene

Orthologs for ZBTB11-AS1 Gene

Evolution for ZBTB11-AS1 Gene

ENSEMBL:
Gene Tree for ZBTB11-AS1 (if available)
TreeFam:
Gene Tree for ZBTB11-AS1 (if available)

No data available for Orthologs for ZBTB11-AS1 Gene

Paralogs for ZBTB11-AS1 Gene

No data available for Paralogs for ZBTB11-AS1 Gene

Variants for ZBTB11-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZBTB11-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000083406 -- 101,675,936(+) C/A upstream_transcript_variant
rs1000202168 -- 101,675,494(+) T/G upstream_transcript_variant
rs1000499192 -- 101,675,655(+) C/T upstream_transcript_variant
rs1001618498 -- 101,676,501(+) G/A non_coding_transcript_variant
rs1002215022 -- 101,677,682(+) A/C non_coding_transcript_variant

Additional Variant Information for ZBTB11-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZBTB11-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZBTB11-AS1 Gene

Disorders for ZBTB11-AS1 Gene

Additional Disease Information for ZBTB11-AS1

No disorders were found for ZBTB11-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZBTB11-AS1 Gene

Publications for ZBTB11-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  4. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for ZBTB11-AS1 Gene

Sources for ZBTB11-AS1 Gene

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