Aliases for ZBED6CL Gene

Aliases for ZBED6CL Gene

  • ZBED6 C-Terminal Like 2 3 5
  • ZBED6 C-Terminal-Like Protein 3 4
  • C7orf29 3 4
  • Chromosome 7 Open Reading Frame 29 2
  • ZBED6CL 5

External Ids for ZBED6CL Gene

Previous HGNC Symbols for ZBED6CL Gene

  • C7orf29

Previous GeneCards Identifiers for ZBED6CL Gene

  • GC07P150027

Summaries for ZBED6CL Gene

GeneCards Summary for ZBED6CL Gene

ZBED6CL (ZBED6 C-Terminal Like) is a Protein Coding gene. An important paralog of this gene is ZBED6.

Additional gene information for ZBED6CL Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZBED6CL Gene

Genomics for ZBED6CL Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ZBED6CL Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZBED6CL on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for ZBED6CL

Genomic Locations for ZBED6CL Gene

Genomic Locations for ZBED6CL Gene
10,083 bases
Plus strand
2,873 bases
Plus strand

Genomic View for ZBED6CL Gene

Genes around ZBED6CL on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZBED6CL Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZBED6CL Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZBED6CL Gene

Proteins for ZBED6CL Gene

  • Protein details for ZBED6CL Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    ZBED6 C-terminal-like protein
    Protein Accession:

    Protein attributes for ZBED6CL Gene

    236 amino acids
    Molecular mass:
    26352 Da
    Quaternary structure:
    No Data Available
    • Similar to the C-terminus of ZBED6, but lacks BED domains, and therefore is probably not involved in transcriptional regulation. Encoded by a DNA transposon located in the 5'-untranslated region (5'-UTR) of LLRC61.

neXtProt entry for ZBED6CL Gene

Post-translational modifications for ZBED6CL Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZBED6CL Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZBED6CL Gene

Domains & Families for ZBED6CL Gene

Gene Families for ZBED6CL Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for ZBED6CL Gene

genes like me logo Genes that share domains with ZBED6CL: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZBED6CL Gene

Function for ZBED6CL Gene

Phenotypes From GWAS Catalog for ZBED6CL Gene

genes like me logo Genes that share phenotypes with ZBED6CL: view

Animal Model Products

CRISPR Products

miRNA for ZBED6CL Gene

miRTarBase miRNAs that target ZBED6CL

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZBED6CL

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZBED6CL Gene

Localization for ZBED6CL Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZBED6CL gene
Compartment Confidence
mitochondrion 2
nucleus 2
cytosol 0

Subcellular locations from the

Human Protein Atlas (HPA)
  • Nuclear membrane (2)
  • Vesicles (2)
See all subcellular structures

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ZBED6CL Gene

Pathways & Interactions for ZBED6CL Gene

PathCards logo

SuperPathways for ZBED6CL Gene

No Data Available

Interacting Proteins for ZBED6CL Gene

STRING Interaction Network Preview (showing top 2 STRING interactants - click image to see details)
STRING Interaction Network
Selected Interacting proteins: ENSP00000343242 Q96FA7-ZB6CL_HUMAN for ZBED6CL Gene via STRING IID

Gene Ontology (GO) - Biological Process for ZBED6CL Gene


No data available for Pathways by source and SIGNOR curated interactions for ZBED6CL Gene

Drugs & Compounds for ZBED6CL Gene

No Compound Related Data Available

Transcripts for ZBED6CL Gene

mRNA/cDNA for ZBED6CL Gene

2 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZBED6CL

Alternative Splicing Database (ASD) splice patterns (SP) for ZBED6CL Gene

No ASD Table

Relevant External Links for ZBED6CL Gene

GeneLoc Exon Structure for

Expression for ZBED6CL Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZBED6CL Gene

mRNA differential expression in normal tissues according to GTEx for ZBED6CL Gene

This gene is overexpressed in Adrenal Gland (x21.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZBED6CL Gene

Protein tissue co-expression partners for ZBED6CL Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZBED6CL

genes like me logo Genes that share expression patterns with ZBED6CL: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZBED6CL Gene

Orthologs for ZBED6CL Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZBED6CL Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia ZBED6CL 30
  • 99.01 (n)
(Bos Taurus)
Mammalia C4H7orf29 30
  • 72.73 (n)
(Ornithorhynchus anatinus)
Mammalia ZBED6CL 31
  • 57 (a)
Species where no ortholog for ZBED6CL was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for ZBED6CL Gene

Gene Tree for ZBED6CL (if available)
Gene Tree for ZBED6CL (if available)
Evolutionary constrained regions (ECRs) for ZBED6CL: view image

Paralogs for ZBED6CL Gene

Paralogs for ZBED6CL Gene

genes like me logo Genes that share paralogs with ZBED6CL: view

Variants for ZBED6CL Gene

Additional dbSNP identifiers (rs#s) for ZBED6CL Gene

Structural Variations from Database of Genomic Variants (DGV) for ZBED6CL Gene

Variant ID Type Subtype PubMed ID
dgv3695n106 OTHER inversion 24896259
dgv435n21 CNV loss 19592680
nsv1015582 CNV gain 25217958
nsv1034409 CNV gain 25217958
nsv1067934 OTHER inversion 25765185
nsv1151906 OTHER inversion 26484159
nsv508490 CNV deletion 20534489
nsv521407 CNV loss 19592680
nsv608990 CNV gain 21841781
nsv951645 CNV deletion 24416366

Variation tolerance for ZBED6CL Gene

Residual Variation Intolerance Score: 67.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.99; 68.33% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ZBED6CL Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZBED6CL Gene

Disorders for ZBED6CL Gene

No disorders were found for ZBED6CL Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZBED6CL Gene

Publications for ZBED6CL Gene

  1. ZBED evolution: repeated utilization of DNA transposons as regulators of diverse host functions. (PMID: 23533661) Hayward A … Jern P (PloS one 2013) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4
  3. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier LW … Wilson RK (Nature 2003) 3 4
  4. Toward an understanding of the protein interaction network of the human liver. (PMID: 21988832) Wang J … Yang X (Molecular systems biology 2011) 3
  5. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P … Vidal M (Genomics 2007) 3

Products for ZBED6CL Gene

Sources for ZBED6CL Gene