YRDCP3 Gene (Pseudogene)

YrdC N(6)-Threonylcarbamoyltransferase Domain Containing Pseudogene 3

GC21P040863
GIFtS:
5
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Aliases for YRDCP3 Gene

Aliases for YRDCP3 Gene

  • YrdC N(6)-Threonylcarbamoyltransferase Domain Containing Pseudogene 3 2 3 5
  • YrdC Domain Containing (E. Coli) Pseudogene 3 2
  • YrdC Domain Containing Pseudogene 3 3
  • YRDCP3 5

External Ids for YRDCP3 Gene

Previous GeneCards Identifiers for YRDCP3 Gene

  • GC00U933478
  • GC21P042236

Summaries for YRDCP3 Gene

GeneCards Summary for YRDCP3 Gene

YRDCP3 (YrdC N(6)-Threonylcarbamoyltransferase Domain Containing Pseudogene 3) is a Pseudogene.

Additional gene information for YRDCP3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for YRDCP3 Gene

Genomics for YRDCP3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for YRDCP3 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH21J040864 Enhancer 0.2 Ensembl 600.7 +0.9 907 1 lnc-BACE2-3 YRDCP3 DSCAM piR-31199-207 BACE2
GH21J040834 Enhancer 0.2 Ensembl 13 -29.1 -29093 0.6 YRDCP3 DSCAM piR-38352-351 PCP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around YRDCP3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for YRDCP3 Gene

Genomic Locations for YRDCP3 Gene
chr21:40,863,994-40,864,473
(GRCh38/hg38)
Size:
480 bases
Orientation:
Plus strand
chr21:42,235,920-42,236,399
(GRCh37/hg19)
Size:
480 bases
Orientation:
Plus strand

Genomic View for YRDCP3 Gene

Genes around YRDCP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
YRDCP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for YRDCP3 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for YRDCP3 Gene

Proteins for YRDCP3 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for YRDCP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for YRDCP3 Gene

Domains & Families for YRDCP3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for YRDCP3 Gene

Function for YRDCP3 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for YRDCP3 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for YRDCP3 Gene

Localization for YRDCP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for YRDCP3 Gene

Pathways & Interactions for YRDCP3 Gene

PathCards logo

SuperPathways for YRDCP3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for YRDCP3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for YRDCP3 Gene

Drugs & Compounds for YRDCP3 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for YRDCP3 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for YRDCP3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for YRDCP3 Gene

No ASD Table

Relevant External Links for YRDCP3 Gene

GeneLoc Exon Structure for
YRDCP3

Expression for YRDCP3 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for YRDCP3 Gene

mRNA expression in normal human tissues for YRDCP3 Gene
mRNA expression by GTEx for YRDCP3 Gene
genes like me logo Genes that share expression patterns with YRDCP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for YRDCP3 Gene

Orthologs for YRDCP3 Gene

Evolution for YRDCP3 Gene

ENSEMBL:
Gene Tree for YRDCP3 (if available)
TreeFam:
Gene Tree for YRDCP3 (if available)

No data available for Orthologs for YRDCP3 Gene

Paralogs for YRDCP3 Gene

No data available for Paralogs for YRDCP3 Gene

Variants for YRDCP3 Gene

Additional Variant Information for YRDCP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
YRDCP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for YRDCP3 Gene

Disorders for YRDCP3 Gene

No disorders were found for YRDCP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for YRDCP3 Gene

Publications for YRDCP3 Gene

  1. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M … Chromosome 21 mapping and sequencing consortium (Nature 2000) 3

No data available for Mastermind for YRDCP3 Gene

Products for YRDCP3 Gene

Sources for YRDCP3 Gene