Aliases for YRDCP1 Gene

Aliases for YRDCP1 Gene

  • YrdC N(6)-Threonylcarbamoyltransferase Domain Containing Pseudogene 1 2 3 5
  • YrdC Domain Containing (E. Coli) Pseudogene 1 2
  • YrdC Domain Containing Pseudogene 1 3
  • YRDCP1 5

External Ids for YRDCP1 Gene

Previous GeneCards Identifiers for YRDCP1 Gene

  • GC09M097195

Summaries for YRDCP1 Gene

GeneCards Summary for YRDCP1 Gene

YRDCP1 (YrdC N(6)-Threonylcarbamoyltransferase Domain Containing Pseudogene 1) is a Pseudogene.

Additional gene information for YRDCP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for YRDCP1 Gene

Genomics for YRDCP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for YRDCP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J094373 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.2 +58.0 57992 3.8 CREB1 PRDM10 ZNF629 BACH1 LARP7 GABPA MTA2 ZNF143 PHF21A RBFOX2 MFSD14B ENSG00000232063 ZNF169 YRDCP1 FBP2 RF00017-7724
GH09J094409 Enhancer 0.9 Ensembl dbSUPER 0.4 +21.9 21892 8.4 LEF1 PKNOX1 BRD9 HDAC1 SOX6 TCF12 CTBP1 HDAC2 PHB2 AFF1 MFSD14B ENSG00000232063 ZNF169 YRDCP1 FBP2 RF00017-7724
GH09J094385 Enhancer 0.9 Ensembl dbSUPER 0.3 +39.2 39193 21.4 RFX1 ZNF740 DPF2 NFE2 ZNF316 MEF2D ZNF592 ZBTB17 NCOR1 MAFG MFSD14B ENSG00000232063 YRDCP1 FBP2 RF00017-7724
GH09J094426 Enhancer 0.5 Ensembl dbSUPER 0.4 +7.0 6992 0.2 IKZF1 NR2F1 YRDCP1 MFSD14B FBP2 RF00017-7724
GH09J094424 Enhancer 0.3 Ensembl dbSUPER 0.4 +6.2 6192 0.6 MFSD14B YRDCP1 FBP2 RF00017-7724
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around YRDCP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for YRDCP1 Gene

Genomic Locations for YRDCP1 Gene
chr9:94,432,514-94,433,293
(GRCh38/hg38)
Size:
780 bases
Orientation:
Minus strand
chr9:97,194,916-97,195,538
(GRCh37/hg19)
Size:
623 bases
Orientation:
Minus strand

Genomic View for YRDCP1 Gene

Genes around YRDCP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
YRDCP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for YRDCP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for YRDCP1 Gene

Proteins for YRDCP1 Gene

Post-translational modifications for YRDCP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for YRDCP1 Gene

Domains & Families for YRDCP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for YRDCP1 Gene

Function for YRDCP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for YRDCP1 Gene

Localization for YRDCP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for YRDCP1 Gene

Pathways & Interactions for YRDCP1 Gene

PathCards logo

SuperPathways for YRDCP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for YRDCP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for YRDCP1 Gene

Drugs & Compounds for YRDCP1 Gene

No Compound Related Data Available

Transcripts for YRDCP1 Gene

mRNA/cDNA for YRDCP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for YRDCP1 Gene

No ASD Table

Relevant External Links for YRDCP1 Gene

GeneLoc Exon Structure for
YRDCP1

Expression for YRDCP1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for YRDCP1 Gene

Orthologs for YRDCP1 Gene

Evolution for YRDCP1 Gene

ENSEMBL:
Gene Tree for YRDCP1 (if available)
TreeFam:
Gene Tree for YRDCP1 (if available)

No data available for Orthologs for YRDCP1 Gene

Paralogs for YRDCP1 Gene

No data available for Paralogs for YRDCP1 Gene

Variants for YRDCP1 Gene

Additional Variant Information for YRDCP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
YRDCP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for YRDCP1 Gene

Disorders for YRDCP1 Gene

No disorders were found for YRDCP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for YRDCP1 Gene

Publications for YRDCP1 Gene

No publications were found for YRDCP1 Gene.

No data available for Mastermind for YRDCP1 Gene

Products for YRDCP1 Gene

Sources for YRDCP1 Gene