Aliases for YEATS2-AS1 Gene

Subcategory (RNA class) for YEATS2-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for YEATS2-AS1 Gene

  • YEATS2 Antisense RNA 1 2 3 5
  • YEATS2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • YEATS2-AS1 2 168
  • NONHSAG036826 92
  • HSALNG0031185 167

External Ids for YEATS2-AS1 Gene

Previous GeneCards Identifiers for YEATS2-AS1 Gene

  • GC00U933631
  • GC03M183526

Summaries for YEATS2-AS1 Gene

GeneCards Summary for YEATS2-AS1 Gene

YEATS2-AS1 (YEATS2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for YEATS2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for YEATS2-AS1 Gene

Genomics for YEATS2-AS1 Gene

GeneHancer (GH) Regulatory Elements for YEATS2-AS1 Gene

Promoters and enhancers for YEATS2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J183809 Enhancer 0.4 ENCODE dbSUPER 526.8 +1.3 1290 1 GATA3 YEATS2-AS1 RF00994-709 YEATS2
GH03J183812 Enhancer 0.2 dbSUPER 500.7 -1.5 -1539 0.2 YEATS2-AS1 HSALNG0031186 YEATS2
GH03J183811 Enhancer 0.2 dbSUPER 500.7 -1.0 -1000 0.5 YEATS2-AS1 HSALNG0031186 YEATS2
GH03J183824 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 15.3 -14.8 -14769 3.1 MYC USF1 ZFX CTCF ZIC2 ZBTB26 CHD1 ZNF341 SIN3A SP2 MAP6D1 lnc-PARL-2 YEATS2-AS1 ENSG00000283765 PARL
GH03J183883 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 12.6 -73.4 -73417 3.2 FOXK2 HNRNPK ZBTB40 ZNF217 EP300 CTCF SIN3A NRF1 TCF12 MYC PARL ENSG00000283765 RPSAP31 lnc-PARL-1 ALG3 EIF2B5 FAM131A POLR2H ABCC5 ENSG00000228205
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around YEATS2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for YEATS2-AS1 Gene

Genomic Locations for YEATS2-AS1 Gene
chr3:183,806,457-183,810,783
(GRCh38/hg38)
Size:
4,327 bases
Orientation:
Minus strand
chr3:183,524,245-183,528,571
(GRCh37/hg19)
Size:
4,327 bases
Orientation:
Minus strand

Genomic View for YEATS2-AS1 Gene

Genes around YEATS2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
YEATS2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for YEATS2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for YEATS2-AS1 Gene

Proteins for YEATS2-AS1 Gene

Post-translational modifications for YEATS2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for YEATS2-AS1 Gene

Domains & Families for YEATS2-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for YEATS2-AS1 Gene

Function for YEATS2-AS1 Gene

Phenotypes From GWAS Catalog for YEATS2-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for YEATS2-AS1 Gene

Localization for YEATS2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for YEATS2-AS1 Gene

Pathways & Interactions for YEATS2-AS1 Gene

PathCards logo

SuperPathways for YEATS2-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for YEATS2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for YEATS2-AS1 Gene

Drugs & Compounds for YEATS2-AS1 Gene

No Compound Related Data Available

Transcripts for YEATS2-AS1 Gene

mRNA/cDNA for YEATS2-AS1 Gene

7 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
1 LncBook transcripts :
6 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for YEATS2-AS1 Gene

No ASD Table

Relevant External Links for YEATS2-AS1 Gene

GeneLoc Exon Structure for
YEATS2-AS1

Expression for YEATS2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for YEATS2-AS1 Gene

genes like me logo Genes that share expression patterns with YEATS2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for YEATS2-AS1 Gene

Orthologs for YEATS2-AS1 Gene

Evolution for YEATS2-AS1 Gene

ENSEMBL:
Gene Tree for YEATS2-AS1 (if available)
TreeFam:
Gene Tree for YEATS2-AS1 (if available)

No data available for Orthologs for YEATS2-AS1 Gene

Paralogs for YEATS2-AS1 Gene

No data available for Paralogs for YEATS2-AS1 Gene

Variants for YEATS2-AS1 Gene

Additional dbSNP identifiers (rs#s) for YEATS2-AS1 Gene

Additional Variant Information for YEATS2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
YEATS2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for YEATS2-AS1 Gene

Disorders for YEATS2-AS1 Gene

Additional Disease Information for YEATS2-AS1

No disorders were found for YEATS2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for YEATS2-AS1 Gene

Publications for YEATS2-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54

Products for YEATS2-AS1 Gene

Sources for YEATS2-AS1 Gene