Aliases for XRCC6P3 Gene

Aliases for XRCC6P3 Gene

  • X-Ray Repair Cross Complementing 6 Pseudogene 3 2 3 5
  • X-Ray Repair Complementing Defective Repair In Chinese Hamster Cells 6 Pseudogene 3 2 3
  • Thyroid Autoantigen 70kDa Pseudogene 3
  • XRCC6P3 5

External Ids for XRCC6P3 Gene

Previous GeneCards Identifiers for XRCC6P3 Gene

  • GC01M220491

Summaries for XRCC6P3 Gene

GeneCards Summary for XRCC6P3 Gene

XRCC6P3 (X-Ray Repair Cross Complementing 6 Pseudogene 3) is a Pseudogene.

Additional gene information for XRCC6P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for XRCC6P3 Gene

Genomics for XRCC6P3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for XRCC6P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J220299 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas 0.4 +14.8 14829 2.2 ATF7 PRDM10 ZNF629 ZNF512 RFX1 LEF1 IKZF1 ZNF692 JUND DDX20 RAB3GAP2 RPS15AP12 SNX2P1 C1orf115 XRCC6P3 lnc-IARS2-4 MARK1
GH01J220297 Enhancer 0.5 Ensembl 0.4 +17.0 17029 1.4 RFX1 PKNOX1 MGA MEIS2 L3MBTL2 CBFA2T3 lnc-IARS2-4 XRCC6P3 RAB3GAP2 MARK1
GH01J220290 Enhancer 0.3 Ensembl 0.3 +25.0 25029 1 SCRT2 SCRT1 lnc-IARS2-4 RAB3GAP2 XRCC6P3 MARK1
GH01J220294 Enhancer 0.2 Ensembl 0.4 +21.0 21029 0.2 RAB3GAP2 lnc-IARS2-4 XRCC6P3 MARK1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around XRCC6P3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for XRCC6P3 Gene

Genomic Locations for XRCC6P3 Gene
chr1:220,313,709-220,315,730
(GRCh38/hg38)
Size:
2,022 bases
Orientation:
Minus strand
chr1:220,487,080-220,489,072
(GRCh37/hg19)
Size:
1,993 bases
Orientation:
Minus strand

Genomic View for XRCC6P3 Gene

Genes around XRCC6P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
XRCC6P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for XRCC6P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for XRCC6P3 Gene

Proteins for XRCC6P3 Gene

Post-translational modifications for XRCC6P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for XRCC6P3 Gene

Domains & Families for XRCC6P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for XRCC6P3 Gene

Function for XRCC6P3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for XRCC6P3 Gene

Localization for XRCC6P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for XRCC6P3 Gene

Pathways & Interactions for XRCC6P3 Gene

PathCards logo

SuperPathways for XRCC6P3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for XRCC6P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for XRCC6P3 Gene

Drugs & Compounds for XRCC6P3 Gene

No Compound Related Data Available

Transcripts for XRCC6P3 Gene

mRNA/cDNA for XRCC6P3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for XRCC6P3 Gene

No ASD Table

Relevant External Links for XRCC6P3 Gene

GeneLoc Exon Structure for
XRCC6P3

Expression for XRCC6P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for XRCC6P3 Gene

genes like me logo Genes that share expression patterns with XRCC6P3: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for XRCC6P3 Gene

Orthologs for XRCC6P3 Gene

Evolution for XRCC6P3 Gene

ENSEMBL:
Gene Tree for XRCC6P3 (if available)
TreeFam:
Gene Tree for XRCC6P3 (if available)

No data available for Orthologs for XRCC6P3 Gene

Paralogs for XRCC6P3 Gene

No data available for Paralogs for XRCC6P3 Gene

Variants for XRCC6P3 Gene

Additional Variant Information for XRCC6P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
XRCC6P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for XRCC6P3 Gene

Disorders for XRCC6P3 Gene

Additional Disease Information for XRCC6P3

No disorders were found for XRCC6P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for XRCC6P3 Gene

Publications for XRCC6P3 Gene

  1. DNA damage response involves modulation of Ku70 and Rb functions by cyclin A1 in leukemia cells. (PMID: 17455244) Ji P … Müller-Tidow C (International journal of cancer 2007) 3

Products for XRCC6P3 Gene

Sources for XRCC6P3 Gene