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Aliases for XIAP-AS1 Gene

Subcategory (RNA class) for XIAP-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for XIAP-AS1 Gene

  • XIAP Antisense RNA 1 2 3 5
  • XIAP Antisense RNA 1 (Non-Protein Coding) 2

External Ids for XIAP-AS1 Gene

Previous GeneCards Identifiers for XIAP-AS1 Gene

  • GC00U933592
  • GC0XM123007

Summaries for XIAP-AS1 Gene

GeneCards Summary for XIAP-AS1 Gene

XIAP-AS1 (XIAP Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for XIAP-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for XIAP-AS1 Gene

Genomics for XIAP-AS1 Gene

GeneHancer (GH) Regulatory Elements for XIAP-AS1 Gene

Promoters and enhancers for XIAP-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI123784 Enhancer 1.4 Ensembl ENCODE dbSUPER 12.5 +89.1 89076 1.4 ATF1 FEZF1 TCF12 ZNF766 GLIS2 GATA2 KLF7 ATF7 RUNX3 SP3 CHCHD2P1 RNU6-122P XIAP-AS1 LOC100422369 XIAP RNU7-69P
GH0XI123779 Enhancer 1.1 ENCODE dbSUPER 12.5 +92.8 92814 4.2 PKNOX1 FOXA2 ZFP64 DMAP1 ZNF48 ZNF213 FOS ZNF202 ZC3H11A REST THOC2 FERP1 LOC101928402 ENSG00000199705 XIAP RNU6-122P XIAP-AS1 LOC100422369 CHCHD2P1 RNU7-69P
GH0XI123755 Enhancer 1 Ensembl ENCODE dbSUPER 12.3 +117.4 117440 1.8 KLF1 CBFA2T3 ZFHX2 GLIS2 JUND KLF16 IKZF1 KLF9 CBFA2T2 KLF7 XIAP-AS1 RNU6-122P LOC100422369 MEMO1P4 THOC2
GH0XI123951 Enhancer 0.9 ENCODE dbSUPER 12.6 -78.1 -78144 1 GATAD2A SOX6 CHD4 CEBPG THRB GABPA KAT8 SP1 ETV4 CEBPA LOC100422369 RNU6-122P XIAP-AS1 STAG2
GH0XI123953 Enhancer 0.7 ENCODE 12.6 -79.7 -79655 0.9 HDAC1 ELF3 MEIS2 FOXA2 CEBPG RARA ZNF7 HNF4G TRIM24 GATAD2A LOC100422369 XIAP-AS1 RNU6-122P LOC101928402 STAG2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around XIAP-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for XIAP-AS1 Gene

Genomic Locations for XIAP-AS1 Gene
chrX:123,872,626-123,873,932
(GRCh38/hg38)
Size:
1,307 bases
Orientation:
Minus strand
chrX:123,006,476-123,007,782
(GRCh37/hg19)

Genomic View for XIAP-AS1 Gene

Genes around XIAP-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
XIAP-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for XIAP-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for XIAP-AS1 Gene

Proteins for XIAP-AS1 Gene

Post-translational modifications for XIAP-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for XIAP-AS1 Gene

Domains & Families for XIAP-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for XIAP-AS1 Gene

Function for XIAP-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for XIAP-AS1 Gene

Localization for XIAP-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for XIAP-AS1 Gene

Pathways & Interactions for XIAP-AS1 Gene

SuperPathways for XIAP-AS1 Gene

No Data Available

Interacting Proteins for XIAP-AS1 Gene

Gene Ontology (GO) - Biological Process for XIAP-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for XIAP-AS1 Gene

Drugs & Compounds for XIAP-AS1 Gene

No Compound Related Data Available

Transcripts for XIAP-AS1 Gene

mRNA/cDNA for XIAP-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for XIAP-AS1 Gene

No ASD Table

Relevant External Links for XIAP-AS1 Gene

GeneLoc Exon Structure for
XIAP-AS1
ECgene alternative splicing isoforms for
XIAP-AS1

Expression for XIAP-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for XIAP-AS1 Gene

genes like me logo Genes that share expression patterns with XIAP-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for XIAP-AS1 Gene

Orthologs for XIAP-AS1 Gene

Evolution for XIAP-AS1 Gene

ENSEMBL:
Gene Tree for XIAP-AS1 (if available)
TreeFam:
Gene Tree for XIAP-AS1 (if available)

No data available for Orthologs for XIAP-AS1 Gene

Paralogs for XIAP-AS1 Gene

No data available for Paralogs for XIAP-AS1 Gene

Variants for XIAP-AS1 Gene

Additional Variant Information for XIAP-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
XIAP-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for XIAP-AS1 Gene

Disorders for XIAP-AS1 Gene

Additional Disease Information for XIAP-AS1

No disorders were found for XIAP-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for XIAP-AS1 Gene

Publications for XIAP-AS1 Gene

  1. The long noncoding RNA XIAP-AS1 promotes XIAP transcription by XIAP-AS1 interacting with Sp1 in gastric cancer cells. (PMID: 28792527) Cai J … Zhang ZT (PloS one 2017) 3 58
  2. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for XIAP-AS1 Gene

Sources for XIAP-AS1 Gene

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