Aliases for X05490 Gene

Subcategory (RNA class) for X05490 Gene

scRNA

Number of RNA Genes sources:

1 / 17

Aliases for X05490 Gene

No Aliases found

Previous GeneCards Identifiers for X05490 Gene

  • GC06P052999

No data available for External Ids for X05490 Gene

Summaries for X05490 Gene

GeneCards Summary for X05490 Gene

X05490 is an RNA Gene, and is affiliated with the scRNA class.

Rfam classification for X05490 Gene

Additional gene information for X05490 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for X05490 Gene

Genomics for X05490 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for X05490 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J052992 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -0.7 -719 4.6 HNRNPL CREB1 GATAD2A CTCF PRDM10 ZNF629 LEF1 IKZF1 NFKBIZ KDM1A ENSG00000202198 GSTA4 MN298307 RN7SK X05490 EFHC1 MCM3 CILK1 GSTA3 RF00019-091
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around X05490 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for X05490 Gene

Genomic Locations for X05490 Gene
chr6:52,995,620-52,995,951
(GRCh38/hg38)
Size:
332 bases
Orientation:
Plus strand

Genomic View for X05490 Gene

Genes around X05490 on UCSC Golden Path with GeneCards custom track
X05490 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

X05490 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for X05490 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for X05490 Gene

Proteins for X05490 Gene

Post-translational modifications for X05490 Gene

No Post-translational modifications

No data available for DME Specific Peptides for X05490 Gene

Domains & Families for X05490 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for X05490 Gene

Function for X05490 Gene

Phenotypes From GWAS Catalog for X05490 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for X05490 Gene

Localization for X05490 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for X05490 Gene

Pathways & Interactions for X05490 Gene

PathCards logo

SuperPathways for X05490 Gene

No Data Available

Gene Ontology (GO) - Biological Process for X05490 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for X05490 Gene

Drugs & Compounds for X05490 Gene

No Compound Related Data Available

Transcripts for X05490 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for X05490 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004D071D_9606 scRNA 331 1

ENA: X05490.1:245..575:ncRNA,

X05490 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for X05490 Gene

No ASD Table

Relevant External Links for X05490 Gene

GeneLoc Exon Structure for
X05490

No data available for mRNA/cDNA for X05490 Gene

Expression for X05490 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for X05490 Gene

Orthologs for X05490 Gene

No data available for Orthologs and Evolution for X05490 Gene

Paralogs for X05490 Gene

No data available for Paralogs for X05490 Gene

Variants for X05490 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for X05490 Gene

Disorders for X05490 Gene

No disorders were found for X05490 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for X05490 Gene

Publications for X05490 Gene

No publications were found for X05490 Gene.

No data available for Mastermind for X05490 Gene

Products for X05490 Gene

Sources for X05490 Gene