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Aliases for WHAMMP1 Gene

Aliases for WHAMMP1 Gene

  • WAS Protein Homolog Associated With Actin, Golgi Membranes And Microtubules Pseudogene 1 2 3
  • WAS Protein Homology Region 2 Domain Containing 1 Pseudogene 1 2 3
  • AC135983.2 5
  • WHDC1P1 3

External Ids for WHAMMP1 Gene

Previous HGNC Symbols for WHAMMP1 Gene

  • WHDC1P1

Previous GeneCards Identifiers for WHAMMP1 Gene

  • GC15U901022
  • GC15M032814

Summaries for WHAMMP1 Gene

GeneCards Summary for WHAMMP1 Gene

WHAMMP1 (WAS Protein Homolog Associated With Actin, Golgi Membranes And Microtubules Pseudogene 1) is a Pseudogene.

Additional gene information for WHAMMP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WHAMMP1 Gene

Genomics for WHAMMP1 Gene

GeneHancer (GH) Regulatory Elements for WHAMMP1 Gene

Promoters and enhancers for WHAMMP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I032535 Promoter 0.8 Ensembl 550.8 +0.6 625 2.6 ZNF335 RB1 SIN3A KLF9 ZFX ZBTB26 EZH2 LINC02256 WHAMMP1
GH15I032613 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 9.2 -78.6 -78575 4.2 HDGF ATF1 ARID4B SIN3A DMAP1 NCOA2 ATF7 NFYC MXD4 REST LOC101928042 ENSG00000244952 ARHGAP11A GOLGA8N WHAMMP1 PIR49933
GH15I032659 Enhancer 1 Ensembl ENCODE dbSUPER 5.4 -123.0 -122961 1.4 SMARCE1 CTCF PKNOX1 FOXA2 RFX1 FOXA3 SIN3A MNT ZIC2 FOXA1 ENSG00000212415 GREM1 GOLGA8O WHAMMP1 GC15P032669 LOC105370757 SCG5
GH15I032662 Enhancer 1 Ensembl ENCODE dbSUPER 4.6 -125.9 -125875 0.4 CTCF ZNF654 TRIM22 REST RAD21 ARID2 MBD1 SMC3 ZNF143 RUNX3 SCG5 GREM1 ENSG00000212415 WHAMMP1 GC15P032669 LOC105370757
GH15I032648 Enhancer 0.5 dbSUPER 6.7 -112.6 -112627 1.1 CTCF HNF4G HNF4A RAD21 LOC105370757 ENSG00000212415 SCG5 WHAMMP1 GC15P032669
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around WHAMMP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for WHAMMP1 Gene

Genomic Locations for WHAMMP1 Gene
17,079 bases
Minus strand

Genomic View for WHAMMP1 Gene

Genes around WHAMMP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WHAMMP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WHAMMP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WHAMMP1 Gene

Proteins for WHAMMP1 Gene

Post-translational modifications for WHAMMP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WHAMMP1 Gene

Domains & Families for WHAMMP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WHAMMP1 Gene

Function for WHAMMP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WHAMMP1 Gene

Localization for WHAMMP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WHAMMP1 Gene

Pathways & Interactions for WHAMMP1 Gene

SuperPathways for WHAMMP1 Gene

No Data Available

Interacting Proteins for WHAMMP1 Gene

Gene Ontology (GO) - Biological Process for WHAMMP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for WHAMMP1 Gene

Drugs & Compounds for WHAMMP1 Gene

No Compound Related Data Available

Transcripts for WHAMMP1 Gene

mRNA/cDNA for WHAMMP1 Gene

(2) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for WHAMMP1 Gene

WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for WHAMMP1 Gene

No ASD Table

Relevant External Links for WHAMMP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for WHAMMP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WHAMMP1 Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for WHAMMP1 Gene

Protein tissue co-expression partners for WHAMMP1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of WHAMMP1 Gene:


SOURCE GeneReport for Unigene cluster for WHAMMP1 Gene:

genes like me logo Genes that share expression patterns with WHAMMP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WHAMMP1 Gene

Orthologs for WHAMMP1 Gene

Evolution for WHAMMP1 Gene

Gene Tree for WHAMMP1 (if available)
Gene Tree for WHAMMP1 (if available)

No data available for Orthologs for WHAMMP1 Gene

Paralogs for WHAMMP1 Gene

No data available for Paralogs for WHAMMP1 Gene

Variants for WHAMMP1 Gene

Sequence variations from dbSNP and Humsavar for WHAMMP1 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000198581 -- 32,526,965(-) G/A non_coding_transcript_variant
rs1000270655 -- 32,528,780(-) T/C intron_variant
rs1000607742 -- 32,524,269(-) T/C intron_variant
rs1001382025 -- 32,525,211(-) A/G intron_variant
rs1001411686 -- 32,525,927(-) G/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for WHAMMP1 Gene

Variant ID Type Subtype PubMed ID
nsv974555 CNV duplication 23825009
nsv9238 CNV gain+loss 18304495
nsv568909 CNV loss 21841781
nsv517740 CNV gain+loss 19592680
nsv469587 CNV loss 16826518
nsv433433 CNV gain 18776910
nsv428302 CNV gain+loss 18775914
nsv1160277 CNV duplication 26073780
nsv1126393 CNV deletion 24896259
nsv1121894 CNV deletion 24896259
esv3892661 CNV gain 25118596
esv33337 CNV gain+loss 17666407
esv2761877 CNV gain+loss 21179565
esv2760365 CNV gain+loss 21179565
esv2760023 CNV gain+loss 17122850
esv2422296 CNV duplication 17116639
dgv4446n54 CNV loss 21841781
dgv30n68 CNV gain+loss 17160897
dgv2548n100 CNV loss 25217958
dgv2547n100 CNV loss 25217958
dgv2544n100 CNV gain+loss 25217958
dgv2543n100 CNV gain 25217958
dgv2538n100 CNV loss 25217958

Variation tolerance for WHAMMP1 Gene

Gene Damage Index Score: 7.15; 80.74% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for WHAMMP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for WHAMMP1 Gene

Disorders for WHAMMP1 Gene

Additional Disease Information for WHAMMP1

No disorders were found for WHAMMP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WHAMMP1 Gene

Publications for WHAMMP1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for WHAMMP1 Gene

Sources for WHAMMP1 Gene

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