Aliases for WDR11-AS1 Gene

Subcategory (RNA class) for WDR11-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for WDR11-AS1 Gene

  • WDR11 Antisense RNA 1 2 3 5
  • WDR11 Antisense RNA 1 (Non-Protein Coding) 2 3
  • WDR11-AS1 2 168
  • NONHSAG007033 92
  • HSALNG0081111 167
  • HSALNG0081110 167
  • Lnc-FGFR2-12 168

External Ids for WDR11-AS1 Gene

Previous GeneCards Identifiers for WDR11-AS1 Gene

  • GC10M122524

Summaries for WDR11-AS1 Gene

GeneCards Summary for WDR11-AS1 Gene

WDR11-AS1 (WDR11 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with WDR11-AS1 include Kallmann Syndrome.

Additional gene information for WDR11-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for WDR11-AS1 Gene

Genomics for WDR11-AS1 Gene

GeneHancer (GH) Regulatory Elements for WDR11-AS1 Gene

Promoters and enhancers for WDR11-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around WDR11-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for WDR11-AS1 Gene

Genomic Locations for WDR11-AS1 Gene
chr10:120,757,489-120,851,457
(GRCh38/hg38)
Size:
93,969 bases
Orientation:
Minus strand
chr10:122,521,324-122,610,721
(GRCh37/hg19)
Size:
89,398 bases
Orientation:
Minus strand

Genomic View for WDR11-AS1 Gene

Genes around WDR11-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WDR11-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WDR11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WDR11-AS1 Gene

Proteins for WDR11-AS1 Gene

Post-translational modifications for WDR11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WDR11-AS1 Gene

Domains & Families for WDR11-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for WDR11-AS1 Gene

Function for WDR11-AS1 Gene

Phenotypes From GWAS Catalog for WDR11-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WDR11-AS1 Gene

Localization for WDR11-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WDR11-AS1 Gene

Pathways & Interactions for WDR11-AS1 Gene

PathCards logo

SuperPathways for WDR11-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for WDR11-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for WDR11-AS1 Gene

Drugs & Compounds for WDR11-AS1 Gene

No Compound Related Data Available

Transcripts for WDR11-AS1 Gene

mRNA/cDNA for WDR11-AS1 Gene

18 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
10 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 NONCODE transcripts :
10 LncBook transcripts :
14 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for WDR11-AS1 Gene

No ASD Table

Relevant External Links for WDR11-AS1 Gene

GeneLoc Exon Structure for
WDR11-AS1

Expression for WDR11-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for WDR11-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for WDR11-AS1 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x4.9), Brain - Putamen (basal ganglia) (x4.1), and Brain - Nucleus accumbens (basal ganglia) (x4.1).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for WDR11-AS1

SOURCE GeneReport for Unigene cluster for WDR11-AS1 Gene:

Hs.568750
genes like me logo Genes that share expression patterns with WDR11-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WDR11-AS1 Gene

Orthologs for WDR11-AS1 Gene

Evolution for WDR11-AS1 Gene

ENSEMBL:
Gene Tree for WDR11-AS1 (if available)
TreeFam:
Gene Tree for WDR11-AS1 (if available)

No data available for Orthologs for WDR11-AS1 Gene

Paralogs for WDR11-AS1 Gene

No data available for Paralogs for WDR11-AS1 Gene

Variants for WDR11-AS1 Gene

Additional dbSNP identifiers (rs#s) for WDR11-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for WDR11-AS1 Gene

Variant ID Type Subtype PubMed ID
esv1556377 CNV deletion 17803354
esv25404 CNV loss 19812545
esv2675762 CNV deletion 23128226
esv3624737 CNV gain 21293372
esv3624738 CNV gain 21293372
esv3624740 CNV loss 21293372
nsv1137964 CNV deletion 24896259
nsv522409 CNV loss 19592680
nsv525609 CNV loss 19592680

Additional Variant Information for WDR11-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WDR11-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for WDR11-AS1 Gene

Disorders for WDR11-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for WDR11-AS1 Gene - From: DISEASES

Disorder Aliases PubMed IDs
kallmann syndrome
  • hypogonadotropic hypogonadism and anosmia
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for WDR11-AS1

genes like me logo Genes that share disorders with WDR11-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for WDR11-AS1 Gene

Publications for WDR11-AS1 Gene

  1. Genetic variation modifies risk for neurodegeneration based on biomarker status. (PMID: 25140149) Hohman TJ … Alzheimer's Neuroimaging Initiative (Frontiers in aging neuroscience 2014) 3 54
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3 54
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

Products for WDR11-AS1 Gene

Sources for WDR11-AS1 Gene