Aliases for WDFY3-AS1 Gene

Subcategory (RNA class) for WDFY3-AS1 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for WDFY3-AS1 Gene

  • WDFY3 Antisense RNA 1 2 3 5
  • WDFY3 Antisense RNA 1 (Non-Protein Coding) 2 3
  • WDFY3-AS1 2 5
  • NONHSAG038357.2 91
  • HSALNG0035619 164

External Ids for WDFY3-AS1 Gene

Previous GeneCards Identifiers for WDFY3-AS1 Gene

  • GC00U933603
  • GC04P085725

Summaries for WDFY3-AS1 Gene

GeneCards Summary for WDFY3-AS1 Gene

WDFY3-AS1 (WDFY3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for WDFY3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for WDFY3-AS1 Gene

Genomics for WDFY3-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for WDFY3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J084877 Enhancer 1.1 FANTOM5 Ensembl ENCODE 10.3 +81.6 81587 4.8 CREB1 ZNF629 SOX6 JUND ATF2 NCOR1 MNT ZNF335 CREM BHLHE40 WDFY3-AS1 WDFY3 RNU6-469P RF00026-802 lnc-NKX6-1-10 CDS1
GH04J084680 Promoter/Enhancer 1 Ensembl ENCODE 10.7 -114.0 -113953 3.7 ETV6 GABPA SOX13 TCF7 CTCF CTBP1 FOXA2 MEF2D RUNX1 FOXP1 WDFY3-AS1 CDS1 WDFY3-AS2 RN7SL552P piR-36573-052 WDFY3
GH04J084690 Enhancer 0.8 Ensembl ENCODE 10.5 -105.0 -105013 3.6 SCRT2 SP1 JUND NFE2 CEBPB FOS JUN FOSL1 MAFG EP300 piR-33501 CDS1 WDFY3-AS1 WDFY3-AS2 lnc-NKX6-1-8 WDFY3
GH04J084937 Enhancer 0.6 Ensembl ENCODE 10.6 +141.7 141686 3.8 JUND BHLHE40 JUN SMARCA4 HNF4A POLR2A WDFY3-AS2 WDFY3 WDFY3-AS1 RF00026-802 RNU6-469P CDS1
GH04J084945 Enhancer 0.6 Ensembl ENCODE 10.5 +148.6 148586 3.6 CEBPA CEBPB NR2F6 HLF WDFY3-AS2 WDFY3 RNU6-469P WDFY3-AS1 RF00026-802 CDS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around WDFY3-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for WDFY3-AS1 Gene

Genomic Locations for WDFY3-AS1 Gene
chr4:84,796,614-84,810,403
(GRCh38/hg38)
Size:
13,790 bases
Orientation:
Plus strand
chr4:85,724,411-85,731,544
(GRCh37/hg19)
Size:
7,134 bases
Orientation:
Plus strand

Genomic View for WDFY3-AS1 Gene

Genes around WDFY3-AS1 on UCSC Golden Path with GeneCards custom track
WDFY3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
WDFY3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WDFY3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for WDFY3-AS1 Gene

Proteins for WDFY3-AS1 Gene

Post-translational modifications for WDFY3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WDFY3-AS1 Gene

Domains & Families for WDFY3-AS1 Gene

Gene Families for WDFY3-AS1 Gene

genes like me logo Genes that share domains with WDFY3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for WDFY3-AS1 Gene

Function for WDFY3-AS1 Gene

Phenotypes From GWAS Catalog for WDFY3-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WDFY3-AS1 Gene

Localization for WDFY3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WDFY3-AS1 Gene

Pathways & Interactions for WDFY3-AS1 Gene

PathCards logo

SuperPathways for WDFY3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for WDFY3-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for WDFY3-AS1 Gene

Drugs & Compounds for WDFY3-AS1 Gene

No Compound Related Data Available

Transcripts for WDFY3-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for WDFY3-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000E83664_9606 lncRNA 644 2

HGNC: 40935,

Ensembl: ENST00000510449 (view in UCSC) ,

URS00005BC089_9606 lncRNA 493 2

LncBook: HSALNT0074556,

NONCODE: NONHSAT097246.2,

URS00009BE91C_9606 lncRNA 491 2

LncBook: HSALNT0074557,

NONCODE: NONHSAT198785.1,

WDFY3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for WDFY3-AS1 Gene

No ASD Table

Relevant External Links for WDFY3-AS1 Gene

GeneLoc Exon Structure for
WDFY3-AS1

No data available for mRNA/cDNA for WDFY3-AS1 Gene

Expression for WDFY3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for WDFY3-AS1 Gene

genes like me logo Genes that share expression patterns with WDFY3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WDFY3-AS1 Gene

Orthologs for WDFY3-AS1 Gene

Evolution for WDFY3-AS1 Gene

ENSEMBL:
Gene Tree for WDFY3-AS1 (if available)
TreeFam:
Gene Tree for WDFY3-AS1 (if available)

No data available for Orthologs for WDFY3-AS1 Gene

Paralogs for WDFY3-AS1 Gene

No data available for Paralogs for WDFY3-AS1 Gene

Variants for WDFY3-AS1 Gene

Additional Variant Information for WDFY3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WDFY3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for WDFY3-AS1 Gene

Disorders for WDFY3-AS1 Gene

No disorders were found for WDFY3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for WDFY3-AS1 Gene

Publications for WDFY3-AS1 Gene

No publications were found for WDFY3-AS1 Gene.

Products for WDFY3-AS1 Gene

Sources for WDFY3-AS1 Gene