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This gene encodes WW domain-containing binding protein 4. The WW domain represents a small and compact globular structure that interacts with proline-rich ligands. This encoded protein is a general spliceosomal protein that may play a role in cross-intron bridging of U1 and U2 snRNPs in the spliceosomal complex A. [provided by RefSeq, Jul 2008]
WBP4 (WW Domain Binding Protein 4) is a Protein Coding gene. Diseases associated with WBP4 include Cerebral Amyloid Angiopathy, Itm2b-Related, 2. Among its related pathways are Gene Expression and mRNA Splicing - Major Pathway. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and proline-rich region binding.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0003676 | nucleic acid binding | IEA | -- |
GO:0003723 | RNA binding | IBA | 21873635 |
GO:0005515 | protein binding | IPI | 17500595 |
GO:0008270 | zinc ion binding | IEA | -- |
GO:0046872 | metal ion binding | IEA | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005634 | nucleus | IDA | 28781166 |
GO:0005654 | nucleoplasm | TAS | -- |
GO:0005681 | spliceosomal complex | IEA | -- |
GO:0016607 | nuclear speck | IEA,IDA | 19592703 |
GO:0071005 | U2-type precatalytic spliceosome | IDA | 28781166 |
SuperPathway | Contained pathways | ||
---|---|---|---|
1 | mRNA Splicing - Major Pathway |
.79
|
|
2 | Gene Expression |
.48
|
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000398 | mRNA splicing, via spliceosome | TAS | -- |
GO:0006397 | mRNA processing | IEA | -- |
GO:0008380 | RNA splicing | IBA | 21873635 |
GO:0045292 | mRNA cis splicing, via spliceosome | IDA | 19592703 |
ExUns: | 1a | · | 1b | ^ | 2a | · | 2b | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10a | · | 10b | · | 10c | ^ | 11a | · | 11b |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SP1: | - | ||||||||||||||||||||||||||||||
SP2: | |||||||||||||||||||||||||||||||
SP3: | |||||||||||||||||||||||||||||||
SP4: | |||||||||||||||||||||||||||||||
SP5: |
This gene was present in the common ancestor of animals.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | WBP4 30 31 |
|
OneToOne | |
Dog (Canis familiaris) |
Mammalia | WBP4 30 31 |
|
OneToOne | |
Cow (Bos Taurus) |
Mammalia | WBP4 30 31 |
|
OneToOne | |
Rat (Rattus norvegicus) |
Mammalia | Wbp4 30 |
|
||
Mouse (Mus musculus) |
Mammalia | Wbp4 30 17 31 |
|
OneToOne | |
Oppossum (Monodelphis domestica) |
Mammalia | WBP4 31 |
|
OneToOne | |
Platypus (Ornithorhynchus anatinus) |
Mammalia | WBP4 31 |
|
OneToOne | |
Chicken (Gallus gallus) |
Aves | WBP4 30 31 |
|
OneToOne | |
Lizard (Anolis carolinensis) |
Reptilia | WBP4 31 |
|
OneToOne | |
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | wbp4 30 |
|
||
African clawed frog (Xenopus laevis) |
Amphibia | Xl.1414 30 |
|
||
Zebrafish (Danio rerio) |
Actinopterygii | wbp4 30 31 |
|
OneToOne | |
Fruit Fly (Drosophila melanogaster) |
Insecta | CG4291 30 31 |
|
OneToOne | |
African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP010339 30 |
|
SNP ID | Clinical significance and condition | Chr 13 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
768612 | Benign: not provided | 41,065,241(+) | C/T | SYNONYMOUS_VARIANT | |
VAR_036352 | A breast cancer sample | p.Lys113Arg |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv3580615 | CNV | loss | 25503493 |
esv3631865 | CNV | loss | 21293372 |
nsv561538 | CNV | loss | 21841781 |
nsv832587 | CNV | gain | 17160897 |
Disorder | Aliases | PubMed IDs |
---|---|---|
cerebral amyloid angiopathy, itm2b-related, 2 |
|
|