Aliases for WBP11P1 Gene

Aliases for WBP11P1 Gene

  • WBP11 Pseudogene 1 2 3 5
  • WW Domain Binding Protein 11 Pseudogene 1 2 3
  • HsT3017 2 3
  • WBP11P1 5

External Ids for WBP11P1 Gene

Previous GeneCards Identifiers for WBP11P1 Gene

  • GC18P028347
  • GC18P030091
  • GC18P026948

Summaries for WBP11P1 Gene

GeneCards Summary for WBP11P1 Gene

WBP11P1 (WBP11 Pseudogene 1) is a Pseudogene.

Additional gene information for WBP11P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for WBP11P1 Gene

Genomics for WBP11P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for WBP11P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J032529 Enhancer 0.8 Ensembl ENCODE 0.4 +19.5 19545 2.4 CEBPB MAX EP300 PRDM6 USF2 PKNOX1 MEIS2 TRIM28 HLF ZNF629 WBP11P1 ENSG00000287994 ENSG00000285095 GAREM1 KLHL14
GH18J032548 Enhancer 0.8 Ensembl ENCODE 0.3 +37.4 37438 1.8 CTCF REST SMC3 RAD21 ATF2 SP7 ATF1 CREM CREB1 PKNOX1 ENSG00000287994 WBP11P1 ENSG00000285095 GAREM1 KLHL14
GH18J032552 Enhancer 0.7 Ensembl ENCODE 0.3 +40.9 40949 0.5 CTCF REST TRIM22 SMC3 RAD21 SCRT1 ZNF143 ZNF654 ENSG00000287994 WBP11P1 GAREM1 ENSG00000285095 KLHL14
GH18J032542 Enhancer 0.4 Ensembl 0.3 +30.7 30738 0.4 CEBPA FOXA2 HLF CEBPB ENSG00000287994 WBP11P1 ENSG00000285095 GAREM1 KLHL14
GH18J032550 Enhancer 0.4 Ensembl 0.3 +39.4 39438 0.6 CTCF SIN3A EGR1 ENSG00000287994 WBP11P1 GAREM1 ENSG00000285095 KLHL14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around WBP11P1 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the WBP11P1 gene promoter:
  • C/EBPbeta
  • Cart-1
  • E47
  • HFH-1
  • LUN-1
  • MAZR
  • STAT5B
  • Tal-1
  • Tal-1beta

Genomic Locations for WBP11P1 Gene

Latest Assembly
chr18:32,511,663-32,514,634
(GRCh38/hg38)
Size:
2,972 bases
Orientation:
Plus strand

Previous Assembly
chr18:30,091,626-30,094,597
(GRCh37/hg19 by Entrez Gene)
Size:
2,972 bases
Orientation:
Plus strand

chr18:30,091,626-30,094,597
(GRCh37/hg19 by Ensembl)
Size:
2,972 bases
Orientation:
Plus strand

Genomic View for WBP11P1 Gene

Genes around WBP11P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WBP11P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WBP11P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WBP11P1 Gene

Proteins for WBP11P1 Gene

Post-translational modifications for WBP11P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WBP11P1 Gene

Domains & Families for WBP11P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for WBP11P1 Gene

Function for WBP11P1 Gene

Phenotypes From GWAS Catalog for WBP11P1 Gene

Phenotypes for WBP11P1 Gene

genes like me logo Genes that share phenotypes with WBP11P1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WBP11P1 Gene

Localization for WBP11P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WBP11P1 Gene

Pathways & Interactions for WBP11P1 Gene

PathCards logo

SuperPathways for WBP11P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for WBP11P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for WBP11P1 Gene

Drugs & Compounds for WBP11P1 Gene

No Compound Related Data Available

Transcripts for WBP11P1 Gene

mRNA/cDNA for WBP11P1 Gene

2 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for WBP11P1 Gene

No ASD Table

Relevant External Links for WBP11P1 Gene

GeneLoc Exon Structure for
WBP11P1

Expression for WBP11P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for WBP11P1 Gene

mRNA differential expression in normal tissues according to GTEx for WBP11P1 Gene

This gene is overexpressed in Testis (x40.8).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for WBP11P1

SOURCE GeneReport for Unigene cluster for WBP11P1 Gene:

Hs.549773
genes like me logo Genes that share expression patterns with WBP11P1: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WBP11P1 Gene

Orthologs for WBP11P1 Gene

Evolution for WBP11P1 Gene

ENSEMBL:
Gene Tree for WBP11P1 (if available)
TreeFam:
Gene Tree for WBP11P1 (if available)

No data available for Orthologs for WBP11P1 Gene

Paralogs for WBP11P1 Gene

No data available for Paralogs for WBP11P1 Gene

Variants for WBP11P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for WBP11P1 Gene

Variant ID Type Subtype PubMed ID
nsv961043 CNV duplication 23825009

Additional Variant Information for WBP11P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WBP11P1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance and Variation tolerance for WBP11P1 Gene

Disorders for WBP11P1 Gene

Additional Disease Information for WBP11P1

No disorders were found for WBP11P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WBP11P1 Gene

Publications for WBP11P1 Gene

  1. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 41
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for WBP11P1 Gene

Sources for WBP11P1 Gene