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Aliases for WASIR2 Gene

Subcategory (RNA class) for WASIR2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for WASIR2 Gene

  • WASH And IL9R Antisense RNA 2 2 3 5
  • WASH And IL9R Antisense RNA 2 (Non-Protein Coding) 2 3
  • Non-Protein Coding RNA 286A 2 3
  • NCRNA00286A 3

External Ids for WASIR2 Gene

Previous HGNC Symbols for WASIR2 Gene

  • NCRNA00286A

Previous GeneCards Identifiers for WASIR2 Gene

  • GC16P000079
  • GC16P000082
  • GC16P000085
  • GC16P000089
  • GC16P000094
  • GC16P000099

Summaries for WASIR2 Gene

GeneCards Summary for WASIR2 Gene

WASIR2 (WASH And IL9R Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for WASIR2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WASIR2 Gene

Genomics for WASIR2 Gene

GeneHancer (GH) Regulatory Elements for WASIR2 Gene

Promoters and enhancers for WASIR2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I000022 Promoter 0.7 Ensembl 550.8 +0.2 190 0.6 CTCF EGR1 WASIR2 ENSG00000260803
GH16I000033 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 +12.1 12107 2.4 HDGF ZSCAN4 SIN3A ZNF2 SCRT2 ATF7 FOS ZNF114 CEBPB ELF1 ENSG00000260803 IL9RP3 LUC7L SNRNP25 ENSG00000228779 LMF1 ENSG00000262528 WDR90 LOC105371184 METTL26
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around WASIR2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for WASIR2 Gene

Genomic Locations for WASIR2 Gene
chr16:22,910-25,123
(GRCh38/hg38)
Size:
2,214 bases
Orientation:
Plus strand
chr16:72,910-75,123
(GRCh37/hg19)

Genomic View for WASIR2 Gene

Genes around WASIR2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WASIR2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WASIR2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WASIR2 Gene

Proteins for WASIR2 Gene

Post-translational modifications for WASIR2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WASIR2 Gene

Domains & Families for WASIR2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WASIR2 Gene

Function for WASIR2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WASIR2 Gene

Localization for WASIR2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WASIR2 Gene

Pathways & Interactions for WASIR2 Gene

SuperPathways for WASIR2 Gene

No Data Available

Interacting Proteins for WASIR2 Gene

Gene Ontology (GO) - Biological Process for WASIR2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WASIR2 Gene

Drugs & Compounds for WASIR2 Gene

No Compound Related Data Available

Transcripts for WASIR2 Gene

mRNA/cDNA for WASIR2 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for WASIR2 Gene

WASH and IL9R antisense RNA 2:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for WASIR2 Gene

No ASD Table

Relevant External Links for WASIR2 Gene

GeneLoc Exon Structure for
WASIR2
ECgene alternative splicing isoforms for
WASIR2

Expression for WASIR2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WASIR2 Gene

mRNA differential expression in normal tissues according to GTEx for WASIR2 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x5.4), Brain - Cerebellum (x5.0), and Ovary (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of WASIR2 Gene:

WASIR2

SOURCE GeneReport for Unigene cluster for WASIR2 Gene:

Hs.498519
genes like me logo Genes that share expression patterns with WASIR2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WASIR2 Gene

Orthologs for WASIR2 Gene

Evolution for WASIR2 Gene

ENSEMBL:
Gene Tree for WASIR2 (if available)
TreeFam:
Gene Tree for WASIR2 (if available)

No data available for Orthologs for WASIR2 Gene

Paralogs for WASIR2 Gene

No data available for Paralogs for WASIR2 Gene

Variants for WASIR2 Gene

Sequence variations from dbSNP and Humsavar for WASIR2 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000860396 -- 21,136(+) T/G upstream_transcript_variant
rs1000863218 -- 20,981(+) G/A upstream_transcript_variant
rs1001178363 -- 22,135(+) A/C upstream_transcript_variant
rs1001250401 -- 22,395(+) G/T upstream_transcript_variant
rs1002851944 -- 24,041(+) C/G/T intron_variant

Additional Variant Information for WASIR2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WASIR2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for WASIR2 Gene

Disorders for WASIR2 Gene

Additional Disease Information for WASIR2

No disorders were found for WASIR2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WASIR2 Gene

Publications for WASIR2 Gene

  1. Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16. (PMID: 11157797) Daniels RJ … Higgs DR (Human molecular genetics 2001) 2 3 58

Products for WASIR2 Gene

Sources for WASIR2 Gene

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