Aliases for WASH8P Gene

Aliases for WASH8P Gene

  • WAS Protein Family Homolog 8, Pseudogene 2 3 5
  • WAS Protein Family Homolog 1 Pseudogene 3
  • WASH Complex Subunit 1 Pseudogene 3

External Ids for WASH8P Gene

Summaries for WASH8P Gene

GeneCards Summary for WASH8P Gene

WASH8P (WAS Protein Family Homolog 8, Pseudogene) is a Pseudogene.

Additional gene information for WASH8P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for WASH8P Gene

Genomics for WASH8P Gene

GeneHancer (GH) Regulatory Elements for WASH8P Gene

Promoters and enhancers for WASH8P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J000030 Promoter 1.1 Ensembl CraniofacialAtlas 500.7 +0.9 914 3 ZBTB26 NFRKB GABPB1 ZNF335 SUPT5H HDAC2 MLLT1 ZBTB40 HDGF NR4A1 WASH8P lnc-SLC6A12-12
GH12J000033 Promoter 0.3 Ensembl 500.7 -1.1 -1086 0.2 WASH8P piR-35049-003
GH12J000989 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 26.8 -959.2 -959243 5.5 ZNF217 EP300 ZSCAN5C TCF12 POLR2G GTF2E2 PHF8 ZFX CTCF ZNF639 RAD52 ERC1 ENSG00000250132 WASH8P KDM5A CCDC77 ENSG00000261799 LINC00942 WNT5B lnc-WNK1-3
GH12J000805 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 31 -775.2 -775198 2.6 ZSCAN5C ZNF300 ZNF639 ZNF10 TRIM28 KLF7 ATF2 ZEB1 FOXA2 OSR2 RAD52 WASH8P WNK1 RNU4ATAC16P LOC101929384 ENSG00000261799 KDM5A piR-48325-019 lnc-NINJ2-3
GH12J000386 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 14.8 -356.5 -356526 4.1 ZBTB40 ZNF217 EP300 SIN3A TCF12 POLR2G SP1 NCOR1 GTF2E2 PHF8 CCDC77 KDM5A lnc-CCDC77-1 WASH8P IQSEC3 RAD52 ENSG00000261799 LOC105369594 piR-45012-097
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around WASH8P on UCSC Golden Path with GeneCards custom track

Genomic Locations for WASH8P Gene

Genomic Locations for WASH8P Gene
chr12:14,477-32,015
(GRCh38/hg38)
Size:
17,539 bases
Orientation:
Minus strand
chr12:73,725-91,263
(GRCh37/hg19)
Size:
17,539 bases
Orientation:
Plus strand

Genomic View for WASH8P Gene

Genes around WASH8P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WASH8P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WASH8P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WASH8P Gene

Proteins for WASH8P Gene

Post-translational modifications for WASH8P Gene

No Post-translational modifications

No data available for DME Specific Peptides for WASH8P Gene

Domains & Families for WASH8P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for WASH8P Gene

Function for WASH8P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WASH8P Gene

Localization for WASH8P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WASH8P Gene

Pathways & Interactions for WASH8P Gene

PathCards logo

SuperPathways for WASH8P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for WASH8P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for WASH8P Gene

Drugs & Compounds for WASH8P Gene

No Compound Related Data Available

Transcripts for WASH8P Gene

mRNA/cDNA for WASH8P Gene

7 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for WASH8P Gene

No ASD Table

Relevant External Links for WASH8P Gene

GeneLoc Exon Structure for
WASH8P

Expression for WASH8P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WASH8P Gene

Orthologs for WASH8P Gene

Evolution for WASH8P Gene

ENSEMBL:
Gene Tree for WASH8P (if available)
TreeFam:
Gene Tree for WASH8P (if available)

No data available for Orthologs for WASH8P Gene

Paralogs for WASH8P Gene

No data available for Paralogs for WASH8P Gene

Variants for WASH8P Gene

Structural Variations from Database of Genomic Variants (DGV) for WASH8P Gene

Variant ID Type Subtype PubMed ID
nsv1110202 CNV duplication 24896259
nsv1150293 CNV duplication 26484159
nsv952776 CNV deletion 24416366

Additional Variant Information for WASH8P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WASH8P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for WASH8P Gene

Disorders for WASH8P Gene

Additional Disease Information for WASH8P

No disorders were found for WASH8P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WASH8P Gene

Publications for WASH8P Gene

  1. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3 54
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54
  3. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3 54
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54
  5. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2000) 3 54

Products for WASH8P Gene

Sources for WASH8P Gene