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Aliases for WASH7P Gene

Aliases for WASH7P Gene

  • WAS Protein Family Homolog 7 Pseudogene 2 3 5
  • Family With Sequence Similarity 39, Member F 2 3
  • WAS Protein Family Homolog 5 Pseudogene 3
  • FAM39F 3
  • WASH5P 3

External Ids for WASH7P Gene

Summaries for WASH7P Gene

GeneCards Summary for WASH7P Gene

WASH7P (WAS Protein Family Homolog 7 Pseudogene) is a Pseudogene.

Additional gene information for WASH7P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WASH7P Gene

Genomics for WASH7P Gene

GeneHancer (GH) Regulatory Elements for WASH7P Gene

Promoters and enhancers for WASH7P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I000028 Promoter 0.5 Ensembl 550.8 +0.5 469 1.8 MIR1302-2 MIR1302-2HG WASH7P LOC102724250 LOC440570 LOC101060324 GC01P000024 GC01M000031 LOC105379521
GH01I000998 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 31.9 -970.9 -970919 3.8 CLOCK MLX FEZF1 DMAP1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC ISG15 HES4 ATAD3B ENSG00000230092 WASH7P INTS11 ENSG00000272512 LINC01786 CCNL2 ENSG00000272455
GH01I000957 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11.8 -930.2 -930175 4.1 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A ZNF2 YY1 POLR2B E2F8 NOC2L KLHL17 UBE2J2 C1orf159 ATAD3B ENSG00000230092 ENSG00000237094 WASH7P CDK11A LOC100288069
GH01I000826 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 13.7 -797.9 -797931 2.6 HDGF PKNOX1 CLOCK SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 POLR2B LINC00115 LOC101928626 LOC105378580 ENSG00000237094 ENSG00000230092 CDK11A UBE2J2 ATAD3B LINC01128 WASH7P
GH01I000904 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 13.7 -875.3 -875339 1.4 HDGF ARID4B SIN3A ZNF2 ZNF213 ZNF207 ZNF143 SP3 MXD4 REST ENSG00000272438 LOC284600 CDK11A ENSG00000230092 UBE2J2 ATAD3B WASH7P INTS11 ENSG00000237094 CDK11B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around WASH7P on UCSC Golden Path with GeneCards custom track

Genomic Locations for WASH7P Gene

Genomic Locations for WASH7P Gene
chr1:14,362-29,570
(GRCh38/hg38)
Size:
15,209 bases
Orientation:
Minus strand
chr1:14,362-29,806
(GRCh37/hg19)

Genomic View for WASH7P Gene

Genes around WASH7P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WASH7P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WASH7P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WASH7P Gene

Proteins for WASH7P Gene

Post-translational modifications for WASH7P Gene

No Post-translational modifications

No data available for DME Specific Peptides for WASH7P Gene

Domains & Families for WASH7P Gene

Gene Families for WASH7P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with WASH7P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WASH7P Gene

Function for WASH7P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WASH7P Gene

Localization for WASH7P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WASH7P Gene

Pathways & Interactions for WASH7P Gene

SuperPathways for WASH7P Gene

No Data Available

Interacting Proteins for WASH7P Gene

Gene Ontology (GO) - Biological Process for WASH7P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WASH7P Gene

Drugs & Compounds for WASH7P Gene

No Compound Related Data Available

Transcripts for WASH7P Gene

mRNA/cDNA for WASH7P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for WASH7P Gene

No ASD Table

Relevant External Links for WASH7P Gene

GeneLoc Exon Structure for
WASH7P
ECgene alternative splicing isoforms for
WASH7P

Expression for WASH7P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WASH7P Gene

NURSA nuclear receptor signaling pathways regulating expression of WASH7P Gene:

WASH7P
genes like me logo Genes that share expression patterns with WASH7P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WASH7P Gene

Orthologs for WASH7P Gene

Evolution for WASH7P Gene

ENSEMBL:
Gene Tree for WASH7P (if available)
TreeFam:
Gene Tree for WASH7P (if available)

No data available for Orthologs for WASH7P Gene

Paralogs for WASH7P Gene

No data available for Paralogs for WASH7P Gene

Variants for WASH7P Gene

Sequence variations from dbSNP and Humsavar for WASH7P Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1006037861 -- 21,517(-) G/A intron_variant
rs1030292566 -- 23,244(-) A/G intron_variant
rs1030760013 -- 13,960(-) C/G downstream_transcript_variant
rs1033002464 -- 31,243(-) C/T upstream_transcript_variant
rs1038912427 -- 21,681(-) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for WASH7P Gene

Variant ID Type Subtype PubMed ID
nsv945700 CNV duplication 23825009
nsv945699 CNV duplication 23825009
nsv945484 CNV duplication 23825009
nsv7879 CNV gain+loss 18304495
nsv482937 CNV loss 15286789
nsv471591 CNV loss 15918152
nsv469759 CNV gain 16826518
nsv428112 CNV gain 18775914
nsv1147468 CNV duplication 26484159
nsv1076307 CNV duplication 25765185
esv3433926 CNV duplication 20981092
esv27265 CNV gain+loss 19812545
dgv1n82 CNV duplication 23825009
dgv1n106 CNV duplication 24896259
dgv1e59 CNV duplication 20981092

Additional Variant Information for WASH7P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WASH7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for WASH7P Gene

Disorders for WASH7P Gene

Additional Disease Information for WASH7P

No disorders were found for WASH7P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WASH7P Gene

Publications for WASH7P Gene

  1. Human subtelomeric WASH genes encode a new subclass of the WASP family. (PMID: 18159949) Linardopoulou EV … Trask BJ (PLoS genetics 2007) 2 3 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for WASH7P Gene

Sources for WASH7P Gene

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