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Aliases for VN1R96P Gene

Subcategory (RNA class) for VN1R96P Gene

lncRNA

Aliases for VN1R96P Gene

  • Vomeronasal 1 Receptor 96 Pseudogene 2 3 5

External Ids for VN1R96P Gene

ORGUL Members for VN1R96P Gene

Previous GeneCards Identifiers for VN1R96P Gene

  • GC19M045320
  • GC19M040628
  • GC19M037062
  • GC19M040122
  • GC19M040338
  • GC19M040131

Summaries for VN1R96P Gene

GeneCards Summary for VN1R96P Gene

VN1R96P (Vomeronasal 1 Receptor 96 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for VN1R96P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VN1R96P Gene

Genomics for VN1R96P Gene

GeneHancer (GH) Regulatory Elements for VN1R96P Gene

Promoters and enhancers for VN1R96P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J040143 Promoter/Enhancer 1.2 EPDnew ENCODE 0.3 -22.3 -22334 2.6 ZNF174 IKZF1 IKZF2 PKNOX1 EED RUNX3 NBN BCOR ZNF768 ZNF366 ZNF780A FCGBP SNRPA PAF1 ENSG00000269843 FBL PSMC4 PLEKHG2 NUMBL SUPT5H
GH19J040139 Enhancer 1 Ensembl ENCODE 0.4 -17.8 -17771 0.4 CC2D1A CTCF SP7 PRDM1 RAD21 CREB1 ARID3A RXRA ARID2 TARDBP TTC9B CNTD2 HIPK4 C19orf47 PLD3 ENSG00000206925 GC19M040731 VN1R96P GC19M040744
GH19J040102 Enhancer 0.9 Ensembl 0.4 +18.4 18429 2.8 ZNF121 MAFK ZNF174 ZNF404 MZF1 ZNF680 ZNF560 ZNF547 ZNF331 ZNF221 SNRPA ZNF780A ENSG00000269843 AKT2 ZNF780B FBL SUPT5H PAK4 EID2B RN7SL566P
GH19J040121 Enhancer 0.5 Ensembl 0.7 -3.1 -3071 7.8 REST CTCF ZNF792 ZNF530 ZNF780A FCGBP ENSG00000269069 VN1R96P GC19M040731 GC19M040744
GH19J040119 Enhancer 0.4 ENCODE 0.7 +2.2 2161 0.2 SOX13 LCORL VN1R96P ZNF780A GC19M040744
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around VN1R96P on UCSC Golden Path with GeneCards custom track

Genomic Locations for VN1R96P Gene

Genomic Locations for VN1R96P Gene
chr19:40,121,311-40,122,230
(GRCh38/hg38)
Size:
920 bases
Orientation:
Minus strand
chr19:40,627,218-40,628,137
(GRCh37/hg19)
Size:
920 bases
Orientation:
Minus strand

Genomic View for VN1R96P Gene

Genes around VN1R96P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VN1R96P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VN1R96P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VN1R96P Gene

Proteins for VN1R96P Gene

Post-translational modifications for VN1R96P Gene

No Post-translational modifications

No data available for DME Specific Peptides for VN1R96P Gene

Domains & Families for VN1R96P Gene

Gene Families for VN1R96P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with VN1R96P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for VN1R96P Gene

Function for VN1R96P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VN1R96P Gene

Localization for VN1R96P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for VN1R96P Gene

Pathways & Interactions for VN1R96P Gene

PathCards logo

SuperPathways for VN1R96P Gene

No Data Available

Interacting Proteins for VN1R96P Gene

Gene Ontology (GO) - Biological Process for VN1R96P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for VN1R96P Gene

Drugs & Compounds for VN1R96P Gene

No Compound Related Data Available

Transcripts for VN1R96P Gene

mRNA/cDNA for VN1R96P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for VN1R96P Gene

No ASD Table

Relevant External Links for VN1R96P Gene

GeneLoc Exon Structure for
VN1R96P
ECgene alternative splicing isoforms for
VN1R96P

Expression for VN1R96P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for VN1R96P Gene

mRNA differential expression in normal tissues according to GTEx for VN1R96P Gene

This gene is overexpressed in Testis (x6.6), Brain - Caudate (basal ganglia) (x4.7), Brain - Nucleus accumbens (basal ganglia) (x4.5), Brain - Frontal Cortex (BA9) (x4.4), and Minor Salivary Gland (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of VN1R96P Gene:

VN1R96P
genes like me logo Genes that share expression patterns with VN1R96P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for VN1R96P Gene

Orthologs for VN1R96P Gene

Evolution for VN1R96P Gene

ENSEMBL:
Gene Tree for VN1R96P (if available)
TreeFam:
Gene Tree for VN1R96P (if available)

No data available for Orthologs for VN1R96P Gene

Paralogs for VN1R96P Gene

No data available for Paralogs for VN1R96P Gene

Variants for VN1R96P Gene

Additional Variant Information for VN1R96P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
VN1R96P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VN1R96P Gene

Disorders for VN1R96P Gene

No disorders were found for VN1R96P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for VN1R96P Gene

Publications for VN1R96P Gene

  1. Extreme variability among mammalian V1R gene families. (PMID: 19952141) Young JM … Trask BJ (Genome research 2010) 3 58

No data available for External Links for VN1R96P Gene

Products for VN1R96P Gene

Sources for VN1R96P Gene

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