VN1R12P Gene (Pseudogene)

Vomeronasal 1 Receptor 12, Pseudogene

GC06M027033
GIFtS:
6
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Aliases for VN1R12P Gene

Aliases for VN1R12P Gene

  • Vomeronasal 1 Receptor 12, Pseudogene 2 3 5
  • BA373D17.2 2 3
  • Hs6V1-3p 2 3
  • VNR6I3P 2 3
  • VN1R12P 5

External Ids for VN1R12P Gene

Previous GeneCards Identifiers for VN1R12P Gene

  • GC00U914061
  • GC06U900688
  • GC06M027110
  • GC06M027002
  • GC06M026808

Summaries for VN1R12P Gene

GeneCards Summary for VN1R12P Gene

VN1R12P (Vomeronasal 1 Receptor 12, Pseudogene) is a Pseudogene.

Additional gene information for VN1R12P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for VN1R12P Gene

Genomics for VN1R12P Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for VN1R12P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J027034 Enhancer 0.7 Ensembl 0.4 -6.4 -6358 0.2 GATAD2A RXRB GABPA RUNX3 ZBTB26 FOXP1 SAP130 MIER3 SPI1 ZGPAT LINC00240 BTN2A2 lnc-HIST1H2AG-1 VN1R12P H2BC11 ZNF322
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around VN1R12P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for VN1R12P Gene

Genomic Locations for VN1R12P Gene
chr6:27,033,346-27,034,343
(GRCh38/hg38)
Size:
998 bases
Orientation:
Minus strand
chr6:27,001,125-27,002,122
(GRCh37/hg19)
Size:
998 bases
Orientation:
Minus strand

Genomic View for VN1R12P Gene

Genes around VN1R12P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VN1R12P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VN1R12P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for VN1R12P Gene

Proteins for VN1R12P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for VN1R12P Gene

No Post-translational modifications

No data available for DME Specific Peptides for VN1R12P Gene

Domains & Families for VN1R12P Gene

Gene Families for VN1R12P Gene

HGNC:
genes like me logo Genes that share domains with VN1R12P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for VN1R12P Gene

Function for VN1R12P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for VN1R12P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VN1R12P Gene

Localization for VN1R12P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for VN1R12P Gene

Pathways & Interactions for VN1R12P Gene

PathCards logo

SuperPathways for VN1R12P Gene

No Data Available

Gene Ontology (GO) - Biological Process for VN1R12P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for VN1R12P Gene

Drugs & Compounds for VN1R12P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for VN1R12P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for VN1R12P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for VN1R12P Gene

No ASD Table

Relevant External Links for VN1R12P Gene

GeneLoc Exon Structure for
VN1R12P

Expression for VN1R12P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for VN1R12P Gene

mRNA expression in normal human tissues for VN1R12P Gene
mRNA expression by GTEx for VN1R12P Gene

mRNA differential expression in normal tissues according to GTEx for VN1R12P Gene

This gene is overexpressed in Cervix - Endocervix (x17.3) and Prostate (x4.8).
genes like me logo Genes that share expression patterns with VN1R12P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for VN1R12P Gene

Orthologs for VN1R12P Gene

Evolution for VN1R12P Gene

ENSEMBL:
Gene Tree for VN1R12P (if available)
TreeFam:
Gene Tree for VN1R12P (if available)

No data available for Orthologs for VN1R12P Gene

Paralogs for VN1R12P Gene

No data available for Paralogs for VN1R12P Gene

Variants for VN1R12P Gene

Additional Variant Information for VN1R12P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
VN1R12P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VN1R12P Gene

Disorders for VN1R12P Gene

No disorders were found for VN1R12P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for VN1R12P Gene

Publications for VN1R12P Gene

  1. Extreme variability among mammalian V1R gene families. (PMID: 19952141) Young JM … Trask BJ (Genome research 2010) 3

ExternalLinks

View latest publications for VN1R12P gene in Mastermind

Products for VN1R12P Gene

Sources for VN1R12P Gene