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VIM-AS1 (VIM Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with VIM-AS1 include Colorectal Cancer and Cataract 30.
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS00000C5DE6_9606 | lncRNA | 1351 | 4 |
Ensembl: ENST00000437232 (view in UCSC) , LncBook: HSALNT0159506, LNCipedia: VIM-AS1:5, NONCODE: NONHSAT011608.2, |
URS000075B948_9606 | lncRNA | 1875 | 2 |
HGNC: 44879, RefSeq: NR_108061, |
URS0000410BCC_9606 | lncRNA | 918 | 2 |
Ensembl: ENST00000605833 (view in UCSC) , LNCipedia: VIM-AS1:1, |
URS000075E007_9606 | lncRNA | 1351 | 1 |
RefSeq: NR_108060, |
URS0000EF0A85_9606 | lncRNA | 1233 | 1 |
Ensembl: ENST00000664157 (view in UCSC) , |
SNP ID | Clinical significance and condition | Chr 10 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
703473 | Benign: Cataract 30 | 17,229,521(-) | G/T | NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS_VARIANT | |
772763 | Likely Benign: Cataract 30 | 17,229,964(-) | A/C | MISSENSE_VARIANT,NON_CODING_TRANSCRIPT_VARIANT | |
779851 | Benign: Cataract 30 | 17,229,704(-) | C/T | NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS_VARIANT | |
806442 | Uncertain Significance: not provided | 17,229,445(-) | C/T | MISSENSE_VARIANT,NON_CODING_TRANSCRIPT_VARIANT | |
rs121917775 | Pathogenic: Cataract 30; not provided | 17,229,873(-) | G/A | MISSENSE_VARIANT,NON_CODING_TRANSCRIPT_VARIANT |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv2733617 | CNV | deletion | 23290073 |
nsv1039697 | CNV | loss | 25217958 |
nsv508571 | CNV | deletion | 20534489 |
nsv831801 | CNV | gain | 17160897 |
Disorder | Aliases | PubMed IDs |
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colorectal cancer |
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cataract 30 |
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