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Aliases for VENTXP1 Gene

Subcategory (RNA class) for VENTXP1 Gene


Aliases for VENTXP1 Gene

  • VENT Homeobox Pseudogene 1 2 3 5
  • Cancer/Testis Antigen 18 2 3 4
  • Tumor Antigen NA88A 2 3
  • CT18 3 4
  • VENT Homeobox (Xenopus Laevis) Pseudogene 1 2
  • VENT-Like Homeobox 2 Pseudogene 1 3
  • VENTX2P1 3
  • NA88A 3

External Ids for VENTXP1 Gene

ORGUL Members for VENTXP1 Gene

Previous GeneCards Identifiers for VENTXP1 Gene

  • GC0XP026337
  • GC0XP026486
  • GC0XP024315

Summaries for VENTXP1 Gene

Entrez Gene Summary for VENTXP1 Gene

  • Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the Vent homeobox gene family. [provided by RefSeq, Jul 2008]

GeneCards Summary for VENTXP1 Gene

VENTXP1 (VENT Homeobox Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for VENTXP1 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VENTXP1 Gene

Genomics for VENTXP1 Gene

GeneHancer (GH) Regulatory Elements for VENTXP1 Gene

Top Transcription factor binding sites by QIAGEN in the VENTXP1 gene promoter:
  • POU2F1a
  • POU2F1
  • POU3F2
  • HFH-3
  • FOXI1
  • Hlf
  • FOXO4
  • STAT5B
  • FOXL1
  • FOXJ2 (long isoform)

Genomic Locations for VENTXP1 Gene

Genomic Locations for VENTXP1 Gene
2,716 bases
Plus strand
2,716 bases
Plus strand

Genomic View for VENTXP1 Gene

Genes around VENTXP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VENTXP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VENTXP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VENTXP1 Gene

Proteins for VENTXP1 Gene

  • Protein details for VENTXP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative tumor antigen NA88-A
    Protein Accession:

    Protein attributes for VENTXP1 Gene

    33 amino acids
    Molecular mass:
    3500 Da
    Quaternary structure:
    No Data Available

neXtProt entry for VENTXP1 Gene

Post-translational modifications for VENTXP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VENTXP1 Gene

Domains & Families for VENTXP1 Gene

Gene Families for VENTXP1 Gene

Protein Domains for VENTXP1 Gene


Suggested Antigen Peptide Sequences for VENTXP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with VENTXP1: view

No data available for UniProtKB/Swiss-Prot for VENTXP1 Gene

Function for VENTXP1 Gene

Phenotypes From GWAS Catalog for VENTXP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VENTXP1 Gene

Localization for VENTXP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for VENTXP1 Gene

Pathways & Interactions for VENTXP1 Gene

SuperPathways for VENTXP1 Gene

No Data Available

Interacting Proteins for VENTXP1 Gene

Gene Ontology (GO) - Biological Process for VENTXP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for VENTXP1 Gene

Drugs & Compounds for VENTXP1 Gene

No Compound Related Data Available

Transcripts for VENTXP1 Gene

mRNA/cDNA for VENTXP1 Gene

(2) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for VENTXP1 Gene

VENT homeobox pseudogene 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for VENTXP1 Gene

No ASD Table

Relevant External Links for VENTXP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for VENTXP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for VENTXP1 Gene

mRNA differential expression in normal tissues according to GTEx for VENTXP1 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of VENTXP1 Gene:


SOURCE GeneReport for Unigene cluster for VENTXP1 Gene:


mRNA Expression by UniProt/SwissProt for VENTXP1 Gene:

Tissue specificity: Expressed in testis and melanoma cell lines.
genes like me logo Genes that share expression patterns with VENTXP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for VENTXP1 Gene

Orthologs for VENTXP1 Gene

Evolution for VENTXP1 Gene

Gene Tree for VENTXP1 (if available)
Gene Tree for VENTXP1 (if available)

No data available for Orthologs for VENTXP1 Gene

Paralogs for VENTXP1 Gene

No data available for Paralogs for VENTXP1 Gene

Variants for VENTXP1 Gene

Sequence variations from dbSNP and Humsavar for VENTXP1 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000205799 -- 26,556,672(+) C/A/T upstream_transcript_variant
rs1000476655 -- 26,558,091(+) CCC/CCCC upstream_transcript_variant
rs1000529164 -- 26,557,747(+) C/G upstream_transcript_variant
rs1001479987 -- 26,560,965(+) G/A non_coding_transcript_variant
rs1001532446 -- 26,560,183(+) T/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for VENTXP1 Gene

Variant ID Type Subtype PubMed ID
nsv525877 CNV gain 19592680
nsv522405 CNV gain 19592680

Additional Variant Information for VENTXP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for VENTXP1 Gene

Disorders for VENTXP1 Gene

Additional Disease Information for VENTXP1

No disorders were found for VENTXP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for VENTXP1 Gene

Publications for VENTXP1 Gene

  1. A processed pseudogene codes for a new antigen recognized by a CD8(+) T cell clone on melanoma. (PMID: 10790436) Moreau-Aubry A … Breathnach R (The Journal of experimental medicine 2000) 3 4 58
  2. Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid. (PMID: 23319000) Luykx JJ … Ophoff RA (Molecular psychiatry 2014) 3 58
  3. Framingham Heart Study 100K project: genome-wide associations for cardiovascular disease outcomes. (PMID: 17903304) Larson MG … Levy D (BMC medical genetics 2007) 44 58
  4. Molecular cloning of a human Vent-like homeobox gene. (PMID: 11549314) Moretti PA … D'Andrea RJ (Genomics 2001) 3 58

Products for VENTXP1 Gene

Sources for VENTXP1 Gene

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