Aliases for VDAC2P3 Gene

Aliases for VDAC2P3 Gene

  • VDAC2 Pseudogene 3 2 3
  • Voltage Dependent Anion Channel 2 Pseudogene 3 2 3 5
  • VDAC2P3 5

External Ids for VDAC2P3 Gene

Summaries for VDAC2P3 Gene

GeneCards Summary for VDAC2P3 Gene

VDAC2P3 (VDAC2 Pseudogene 3) is a Pseudogene.

Additional gene information for VDAC2P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for VDAC2P3 Gene

Genomics for VDAC2P3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for VDAC2P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J117643 Enhancer 1.1 FANTOM5 Ensembl dbSUPER 600.7 -1.5 -1474 0.8 ZNF512 DPF2 HDAC1 EP300 HMBOX1 EGR1 RUNX3 HES1 HDAC2 AFF1 VDAC2P3 TENT5C LOC100996263 ENSG00000212266 lnc-GDAP2-9 GDAP2
GH01J118147 Enhancer 0.8 Ensembl ENCODE dbSUPER 6 -506.2 -506174 1 FOXA1 CEBPB ZNF184 GATA3 NFATC3 SPAG17 VDAC2P3 HSALNG0006430 LOC105378930 WDR3
GH01J117644 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -3.2 -3236 1.1 LEF1 IKZF1 JUND DDX20 MTA2 PHF21A MTA1 REST ZNF24 BRD9 ENSG00000212266 TENT5C LOC100996263 VDAC2P3 lnc-GDAP2-9 GDAP2
GH01J117635 Enhancer 0.9 Ensembl dbSUPER 0.7 +4.6 4626 3 IKZF1 ZNF7 SP1 HDAC1 SOX6 CEBPA TCF12 EP300 CTBP1 RUNX3 TENT5C LOC100996263 VDAC2P3 MN308972 GDAP2
GH01J117651 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.4 -12.9 -12872 6 SP1 CREB1 HNRNPL ATF7 PRDM10 LEF1 IKZF1 ZHX2 JUND MTA2 lnc-GDAP2-9 WDR3 TENT5C MAN1A2 GDAP2 VDAC2P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around VDAC2P3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for VDAC2P3 Gene

Genomic Locations for VDAC2P3 Gene
chr1:117,640,340-117,641,727
(GRCh38/hg38)
Size:
1,388 bases
Orientation:
Minus strand
chr1:118,182,962-118,184,425
(GRCh37/hg19)
Size:
1,464 bases
Orientation:
Minus strand

Genomic View for VDAC2P3 Gene

Genes around VDAC2P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VDAC2P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VDAC2P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VDAC2P3 Gene

Proteins for VDAC2P3 Gene

Post-translational modifications for VDAC2P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VDAC2P3 Gene

Domains & Families for VDAC2P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for VDAC2P3 Gene

Function for VDAC2P3 Gene

Phenotypes From GWAS Catalog for VDAC2P3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VDAC2P3 Gene

Localization for VDAC2P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for VDAC2P3 Gene

Pathways & Interactions for VDAC2P3 Gene

PathCards logo

SuperPathways for VDAC2P3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for VDAC2P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for VDAC2P3 Gene

Drugs & Compounds for VDAC2P3 Gene

No Compound Related Data Available

Transcripts for VDAC2P3 Gene

mRNA/cDNA for VDAC2P3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for VDAC2P3 Gene

No ASD Table

Relevant External Links for VDAC2P3 Gene

GeneLoc Exon Structure for
VDAC2P3

Expression for VDAC2P3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for VDAC2P3 Gene

Orthologs for VDAC2P3 Gene

Evolution for VDAC2P3 Gene

ENSEMBL:
Gene Tree for VDAC2P3 (if available)
TreeFam:
Gene Tree for VDAC2P3 (if available)

No data available for Orthologs for VDAC2P3 Gene

Paralogs for VDAC2P3 Gene

No data available for Paralogs for VDAC2P3 Gene

Variants for VDAC2P3 Gene

Additional Variant Information for VDAC2P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
VDAC2P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VDAC2P3 Gene

Disorders for VDAC2P3 Gene

No disorders were found for VDAC2P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for VDAC2P3 Gene

Publications for VDAC2P3 Gene

  1. Mapping of the human Voltage-Dependent Anion Channel isoforms 1 and 2 reconsidered. (PMID: 10049775) Messina A … De Pinto V (Biochemical and biophysical research communications 1999) 3

No data available for Mastermind for VDAC2P3 Gene

Products for VDAC2P3 Gene

Sources for VDAC2P3 Gene