Aliases for VDAC1P11 Gene

Aliases for VDAC1P11 Gene

  • Voltage Dependent Anion Channel 1 Pseudogene 11 2 3 5
  • VDAC1P11 5

External Ids for VDAC1P11 Gene

Previous GeneCards Identifiers for VDAC1P11 Gene

  • GC00U928095
  • GC09U901275
  • GC09M097048

Summaries for VDAC1P11 Gene

GeneCards Summary for VDAC1P11 Gene

VDAC1P11 (Voltage Dependent Anion Channel 1 Pseudogene 11) is a Pseudogene.

Additional gene information for VDAC1P11 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for VDAC1P11 Gene

Genomics for VDAC1P11 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for VDAC1P11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J094288 Enhancer 0.2 Ensembl 600.7 +0.5 454 0.2 VDAC1P11 piR-54740 MFSD14B ZNF169 NUTM2F RF00017-7724
GH09J094300 Enhancer 1 Ensembl ENCODE 0.4 -12.6 -12565 1.5 LEF1 JUND HDAC1 SOX6 NRF1 CBX3 UBTF POLR2A MTA3 EGR1 MFSD14B lnc-ZNF169-2 VDAC1P11 NUTM2F ZNF169 RF00017-7724
GH09J094298 Enhancer 0.8 ENCODE 0.4 -9.8 -9779 0.2 LEF1 JUND ZNF24 DPF2 SOX6 HDAC2 NR2C2 TRIM28 FOSL1 MAFG lnc-ZNF169-2 VDAC1P11 NUTM2F ZNF169 RF00017-7724
GH09J094299 Enhancer 0.6 ENCODE 0.4 -10.8 -10759 0.2 JUND EP300 HMBOX1 CTBP1 MEF2D FOSL1 ZNF644 CEBPB ZEB2 MEIS2 ENSG00000232063 MFSD14B lnc-ZNF169-2 VDAC1P11 NUTM2F ZNF169 RF00017-7724
GH09J094301 Enhancer 0.6 Ensembl 0.4 -10.5 -10546 0.2 EP300 CEBPB CTBP1 MEF2D FOSL1 ZNF644 CEBPG ADNP ZEB2 MEIS2 ENSG00000232063 lnc-ZNF169-2 VDAC1P11 NUTM2F ZNF169 RF00017-7724
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around VDAC1P11 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for VDAC1P11 Gene

Genomic Locations for VDAC1P11 Gene
chr9:94,286,532-94,288,555
(GRCh38/hg38)
Size:
2,024 bases
Orientation:
Minus strand
chr9:97,048,815-97,050,897
(GRCh37/hg19)
Size:
2,083 bases
Orientation:
Minus strand

Genomic View for VDAC1P11 Gene

Genes around VDAC1P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VDAC1P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VDAC1P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VDAC1P11 Gene

Proteins for VDAC1P11 Gene

Post-translational modifications for VDAC1P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VDAC1P11 Gene

Domains & Families for VDAC1P11 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for VDAC1P11 Gene

Function for VDAC1P11 Gene

Phenotypes From GWAS Catalog for VDAC1P11 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VDAC1P11 Gene

Localization for VDAC1P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for VDAC1P11 Gene

Pathways & Interactions for VDAC1P11 Gene

PathCards logo

SuperPathways for VDAC1P11 Gene

No Data Available

Gene Ontology (GO) - Biological Process for VDAC1P11 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for VDAC1P11 Gene

Drugs & Compounds for VDAC1P11 Gene

No Compound Related Data Available

Transcripts for VDAC1P11 Gene

mRNA/cDNA for VDAC1P11 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for VDAC1P11 Gene

No ASD Table

Relevant External Links for VDAC1P11 Gene

GeneLoc Exon Structure for
VDAC1P11

Expression for VDAC1P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for VDAC1P11 Gene

genes like me logo Genes that share expression patterns with VDAC1P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for VDAC1P11 Gene

Orthologs for VDAC1P11 Gene

Evolution for VDAC1P11 Gene

ENSEMBL:
Gene Tree for VDAC1P11 (if available)
TreeFam:
Gene Tree for VDAC1P11 (if available)

No data available for Orthologs for VDAC1P11 Gene

Paralogs for VDAC1P11 Gene

No data available for Paralogs for VDAC1P11 Gene

Variants for VDAC1P11 Gene

Additional Variant Information for VDAC1P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
VDAC1P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VDAC1P11 Gene

Disorders for VDAC1P11 Gene

No disorders were found for VDAC1P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for VDAC1P11 Gene

Publications for VDAC1P11 Gene

  1. Utility of syntenic relationships of VDAC1 pseudogenes for not only an understanding of the phylogenetic divergence history of rodents, but also ascertaining possible pseudogene candidates as genuine pseudogenes. (PMID: 24858958) Ido Y … Shinohara Y (Genomics 2014) 3

Products for VDAC1P11 Gene

Sources for VDAC1P11 Gene