Aliases for UXT-AS1 Gene

Subcategory (RNA class) for UXT-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for UXT-AS1 Gene

  • UXT Antisense RNA 1 2 3 5
  • UXT-AS1 2 5
  • NONHSAG054394.2 91
  • NONHSAG054395.2 91
  • HSALNG0137731 164
  • Lnc-TIMP1-4 165
  • Lnc-TIMP1-1 165

External Ids for UXT-AS1 Gene

Previous GeneCards Identifiers for UXT-AS1 Gene

  • GC0XP047520

Summaries for UXT-AS1 Gene

GeneCards Summary for UXT-AS1 Gene

UXT-AS1 (UXT Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with UXT-AS1 include Myasthenic Syndrome, Congenital, 14.

Additional gene information for UXT-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for UXT-AS1 Gene

Genomics for UXT-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for UXT-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around UXT-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for UXT-AS1 Gene

Genomic Locations for UXT-AS1 Gene
chrX:47,658,833-47,692,326
(GRCh38/hg38)
Size:
33,494 bases
Orientation:
Plus strand
chrX:47,518,232-47,519,776
(GRCh37/hg19)
Size:
1,545 bases
Orientation:
Plus strand

Genomic View for UXT-AS1 Gene

Genes around UXT-AS1 on UCSC Golden Path with GeneCards custom track
UXT-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
UXT-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UXT-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UXT-AS1 Gene

Proteins for UXT-AS1 Gene

Post-translational modifications for UXT-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UXT-AS1 Gene

Domains & Families for UXT-AS1 Gene

Gene Families for UXT-AS1 Gene

genes like me logo Genes that share domains with UXT-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for UXT-AS1 Gene

Function for UXT-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UXT-AS1 Gene

Localization for UXT-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UXT-AS1 Gene

Pathways & Interactions for UXT-AS1 Gene

PathCards logo

SuperPathways for UXT-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for UXT-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for UXT-AS1 Gene

Drugs & Compounds for UXT-AS1 Gene

No Compound Related Data Available

Transcripts for UXT-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for UXT-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000DDB0D_9606 lncRNA 565 4

HGNC: 49239,

RefSeq: NR_028119,

Ensembl: ENST00000591832 (view in UCSC) ,

NONCODE: NONHSAT136891.2,

URS0000534A4E_9606 lncRNA 1525 2

Ensembl: ENST00000590504 (view in UCSC) ,

NONCODE: NONHSAT136892.2,

URS0000EED0FB_9606 lncRNA 3445 1

Ensembl: ENST00000664698 (view in UCSC) ,

URS0000EEFAD9_9606 lncRNA 2686 1

Ensembl: ENST00000658400 (view in UCSC) ,

URS0000EF679E_9606 lncRNA 2172 1

Ensembl: ENST00000670339 (view in UCSC) ,

UXT-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for UXT-AS1 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for UXT-AS1 Gene

No ASD Table

Relevant External Links for UXT-AS1 Gene

GeneLoc Exon Structure for
UXT-AS1

Expression for UXT-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for UXT-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for UXT-AS1

genes like me logo Genes that share expression patterns with UXT-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UXT-AS1 Gene

Orthologs for UXT-AS1 Gene

Evolution for UXT-AS1 Gene

ENSEMBL:
Gene Tree for UXT-AS1 (if available)
TreeFam:
Gene Tree for UXT-AS1 (if available)

No data available for Orthologs for UXT-AS1 Gene

Paralogs for UXT-AS1 Gene

No data available for Paralogs for UXT-AS1 Gene

Variants for UXT-AS1 Gene

Additional dbSNP identifiers (rs#s) for UXT-AS1 Gene

Additional Variant Information for UXT-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UXT-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UXT-AS1 Gene

Disorders for UXT-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for UXT-AS1 Gene - From: DISEASES

Disorder Aliases PubMed IDs
myasthenic syndrome, congenital, 14
  • cms14
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for UXT-AS1

genes like me logo Genes that share disorders with UXT-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for UXT-AS1 Gene

Publications for UXT-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

Products for UXT-AS1 Gene

Sources for UXT-AS1 Gene