Aliases for USP21P1 Gene

Aliases for USP21P1 Gene

  • USP21 Pseudogene 1 2 3 5
  • Ubiquitin Specific Peptidase 21 Pseudogene 3
  • USP21P1 5

External Ids for USP21P1 Gene

Summaries for USP21P1 Gene

GeneCards Summary for USP21P1 Gene

USP21P1 (USP21 Pseudogene 1) is a Pseudogene.

Additional gene information for USP21P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for USP21P1 Gene

Genomics for USP21P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for USP21P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J224145 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 4.6 -23.3 -23341 3.4 GATAD2A TFE3 SOX13 RCOR2 RBFOX2 RXRB IRF2 REST GABPA TOE1 USP21P1 piR-43676-017 piR-38129-065 SERPINE2 FAM124B
GH02J224150 Enhancer 0.9 Ensembl ENCODE 6.3 -18.3 -18315 1.3 GATAD2A TFE3 RCOR2 RXRB CEBPA SOX13 CEBPB TCF7 SP1 FOXA2 USP21P1 piR-43676-017 piR-38129-065 SERPINE2 FAM124B
GH02J224141 Enhancer 0.8 Ensembl ENCODE 5.5 -26.9 -26863 2.4 CEBPB JUND ZNF316 JUN MAFF FOS ZBTB17 MAFG CTCF EP300 USP21P1 piR-43676-017 piR-38129-065 SERPINE2 FAM124B
GH02J224155 Enhancer 0.4 Ensembl 6.3 -13.3 -13263 1.2 ATF7 JUND ATF2 USP21P1 piR-43676-017 piR-38129-065 SERPINE2 FAM124B
GH02J224128 Enhancer 0.5 Ensembl 4.5 -41.3 -41305 1.7 CEBPA MAFK SMAD4 BCL6 FOXA3 USP21P1 piR-43676-017 piR-38129-065 SERPINE2 FAM124B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around USP21P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for USP21P1 Gene

Genomic Locations for USP21P1 Gene
chr2:224,169,664-224,171,737
(GRCh38/hg38)
Size:
2,074 bases
Orientation:
Plus strand
chr2:225,034,381-225,036,255
(GRCh37/hg19)
Size:
1,875 bases
Orientation:
Plus strand

Genomic View for USP21P1 Gene

Genes around USP21P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
USP21P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for USP21P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for USP21P1 Gene

Proteins for USP21P1 Gene

Post-translational modifications for USP21P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for USP21P1 Gene

Domains & Families for USP21P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for USP21P1 Gene

Function for USP21P1 Gene

Phenotypes From GWAS Catalog for USP21P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for USP21P1 Gene

Localization for USP21P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for USP21P1 Gene

Pathways & Interactions for USP21P1 Gene

PathCards logo

SuperPathways for USP21P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for USP21P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for USP21P1 Gene

Drugs & Compounds for USP21P1 Gene

No Compound Related Data Available

Transcripts for USP21P1 Gene

mRNA/cDNA for USP21P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for USP21P1 Gene

No ASD Table

Relevant External Links for USP21P1 Gene

GeneLoc Exon Structure for
USP21P1

Expression for USP21P1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for USP21P1 Gene

Orthologs for USP21P1 Gene

Evolution for USP21P1 Gene

ENSEMBL:
Gene Tree for USP21P1 (if available)
TreeFam:
Gene Tree for USP21P1 (if available)

No data available for Orthologs for USP21P1 Gene

Paralogs for USP21P1 Gene

No data available for Paralogs for USP21P1 Gene

Variants for USP21P1 Gene

Additional Variant Information for USP21P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
USP21P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for USP21P1 Gene

Disorders for USP21P1 Gene

No disorders were found for USP21P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for USP21P1 Gene

Publications for USP21P1 Gene

No publications were found for USP21P1 Gene.

No data available for Mastermind for USP21P1 Gene

Products for USP21P1 Gene

Sources for USP21P1 Gene