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Aliases for URAHP Gene

Aliases for URAHP Gene

  • Urate (Hydroxyiso-) Hydrolase, Pseudogene 2 3 5
  • HIU Hydrolase 2 3
  • 5-Hydroxyisourate Hydrolase Pseudogene 3
  • URAH 3

External Ids for URAHP Gene

Previous GeneCards Identifiers for URAHP Gene

  • GC16M090110

Summaries for URAHP Gene

GeneCards Summary for URAHP Gene

URAHP (Urate (Hydroxyiso-) Hydrolase, Pseudogene) is a Pseudogene.

Additional gene information for URAHP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for URAHP Gene

Genomics for URAHP Gene

GeneHancer (GH) Regulatory Elements for URAHP Gene

Promoters and enhancers for URAHP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I090046 Promoter/Enhancer 1.4 Ensembl ENCODE 550.8 +0.8 751 1.5 FOXA2 ARID4B DMAP1 ZNF48 YY1 GLIS2 ELK1 RXRA SP5 MXD4 URAHP GAS8 DEF8 GC16P090043
GH16I089993 Enhancer 1.5 Ensembl ENCODE dbSUPER 31.6 +52.5 52536 3.5 HDGF PKNOX1 CLOCK FOXA2 ARNT ZFP64 ARID4B SIN3A ZNF2 ZBTB7B PIR44838 ENSG00000259877 AFG3L1P ANKRD11 MC1R ACSF3 TCF25 GAS8 LOC101927863 SNORD68
GH16I089503 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 9.7 +540.8 540800 6.1 CLOCK MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 E2F8 ZNF143 SP3 SPG7 LOC101927863 AFG3L1P MC1R RPL13 ENSG00000268218 ANKRD11 ZC3H18 TCF25 ACSF3
GH16I089971 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.1 +74.3 74320 4.8 HDGF PKNOX1 CLOCK SMAD1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 POLR2B CENPBD1 AFG3L1P DEF8 ACSF3 ANKRD11 ENSG00000198211 TUBB3 ZNF778 URAHP TCF25
GH16I090018 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 9.9 +26.7 26678 5.3 HDGF PKNOX1 CLOCK FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 DBNDD1 GAS8 DEF8 PRDM7 ACSF3 ANKRD11 SNORD68 URAHP GAS8-AS1 TUBB3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around URAHP on UCSC Golden Path with GeneCards custom track

Genomic Locations for URAHP Gene

Genomic Locations for URAHP Gene
chr16:90,039,761-90,047,783
(GRCh38/hg38)
Size:
8,023 bases
Orientation:
Minus strand
chr16:90,106,169-90,114,191
(GRCh37/hg19)

Genomic View for URAHP Gene

Genes around URAHP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
URAHP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for URAHP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for URAHP Gene

Proteins for URAHP Gene

Post-translational modifications for URAHP Gene

No Post-translational modifications

No data available for DME Specific Peptides for URAHP Gene

Domains & Families for URAHP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for URAHP Gene

Function for URAHP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for URAHP Gene

Localization for URAHP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for URAHP Gene

Pathways & Interactions for URAHP Gene

SuperPathways for URAHP Gene

No Data Available

Interacting Proteins for URAHP Gene

Gene Ontology (GO) - Biological Process for URAHP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for URAHP Gene

Drugs & Compounds for URAHP Gene

No Compound Related Data Available

Transcripts for URAHP Gene

mRNA/cDNA for URAHP Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for URAHP Gene

No ASD Table

Relevant External Links for URAHP Gene

GeneLoc Exon Structure for
URAHP
ECgene alternative splicing isoforms for
URAHP

Expression for URAHP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for URAHP Gene

mRNA differential expression in normal tissues according to GTEx for URAHP Gene

This gene is overexpressed in Liver (x6.4) and Ovary (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of URAHP Gene:

URAHP
genes like me logo Genes that share expression patterns with URAHP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for URAHP Gene

Orthologs for URAHP Gene

Evolution for URAHP Gene

ENSEMBL:
Gene Tree for URAHP (if available)
TreeFam:
Gene Tree for URAHP (if available)

No data available for Orthologs for URAHP Gene

Paralogs for URAHP Gene

No data available for Paralogs for URAHP Gene

Variants for URAHP Gene

Sequence variations from dbSNP and Humsavar for URAHP Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs143772256 likely-benign, Ciliary dyskinesia, primary, 33 90,040,498(-) C/G/T genic_downstream_transcript_variant, intron_variant
rs150016330 uncertain-significance, Ciliary dyskinesia, primary, 33 90,043,205(-) G/A intron_variant, non_coding_transcript_variant
rs185608121 likely-benign, Ciliary dyskinesia, primary, 33 90,040,406(-) C/T genic_downstream_transcript_variant, non_coding_transcript_variant
rs201588451 uncertain-significance, Ciliary dyskinesia, primary, 33 90,040,513(-) G/A genic_downstream_transcript_variant, intron_variant
rs377091915 likely-benign, Ciliary dyskinesia, primary, 33 90,042,484(-) G/A downstream_transcript_variant, genic_downstream_transcript_variant, intron_variant

Structural Variations from Database of Genomic Variants (DGV) for URAHP Gene

Variant ID Type Subtype PubMed ID
nsv952080 CNV deletion 24416366
nsv573841 CNV loss 21841781
nsv509641 CNV insertion 20534489
nsv482951 CNV loss 15286789
nsv471120 CNV gain 18288195
nsv471119 CNV loss 18288195
nsv457626 CNV loss 19166990
nsv428331 CNV gain+loss 18775914
nsv1933 CNV insertion 18451855
nsv1070788 CNV deletion 25765185
nsv1067164 CNV gain+loss 25217958
nsv1064351 CNV gain+loss 25217958
nsv1062080 CNV loss 25217958
esv3639608 CNV loss 21293372
esv3639607 CNV gain 21293372
esv3639606 CNV gain 21293372
dgv3067n100 CNV gain 25217958

Additional Variant Information for URAHP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
URAHP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for URAHP Gene

Disorders for URAHP Gene

Additional Disease Information for URAHP

No disorders were found for URAHP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for URAHP Gene

Publications for URAHP Gene

  1. The evolutionary fate of the genes encoding the purine catabolic enzymes in hominoids, birds, and reptiles. (PMID: 20106906) Keebaugh AC … Thomas JW (Molecular biology and evolution 2010) 2 3 58
  2. Completing the uric acid degradation pathway through phylogenetic comparison of whole genomes. (PMID: 16462750) Ramazzina I … Percudani R (Nature chemical biology 2006) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for URAHP Gene

Sources for URAHP Gene

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