UPF3AP1 Gene (Pseudogene)

UPF3A Pseudogene 1

GC17M016746
GIFtS:
7
See more...

Aliases for UPF3AP1 Gene

Aliases for UPF3AP1 Gene

  • UPF3A Pseudogene 1 2 3 5
  • UPF3 Regulator Of Nonsense Transcripts Homolog A (Yeast) Pseudogene 1 2
  • UPF3 Regulator Of Nonsense Transcripts Homolog A Pseudogene 1 3
  • UPF3AP1 5

External Ids for UPF3AP1 Gene

Previous GeneCards Identifiers for UPF3AP1 Gene

  • GC17M016649

Summaries for UPF3AP1 Gene

GeneCards Summary for UPF3AP1 Gene

UPF3AP1 (UPF3A Pseudogene 1) is a Pseudogene.

Additional gene information for UPF3AP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for UPF3AP1 Gene

Genomics for UPF3AP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for UPF3AP1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around UPF3AP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for UPF3AP1 Gene

Latest Assembly
chr17:16,744,740-16,746,870
(GRCh38/hg38)
Size:
2,131 bases
Orientation:
Minus strand

Previous Assembly
chr17:16,648,054-16,650,184
(GRCh37/hg19 by Entrez Gene)
Size:
2,131 bases
Orientation:
Minus strand

chr17:16,648,945-16,650,075
(GRCh37/hg19 by Ensembl)
Size:
1,131 bases
Orientation:
Minus strand

Genomic View for UPF3AP1 Gene

Genes around UPF3AP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UPF3AP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UPF3AP1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for UPF3AP1 Gene

Proteins for UPF3AP1 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for UPF3AP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UPF3AP1 Gene

Domains & Families for UPF3AP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for UPF3AP1 Gene

Function for UPF3AP1 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

Phenotypes From GWAS Catalog for UPF3AP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UPF3AP1 Gene

Localization for UPF3AP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UPF3AP1 Gene

Pathways & Interactions for UPF3AP1 Gene

PathCards logo

SuperPathways for UPF3AP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for UPF3AP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for UPF3AP1 Gene

Drugs & Compounds for UPF3AP1 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for UPF3AP1 Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

mRNA/cDNA for UPF3AP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for UPF3AP1 Gene

No ASD Table

Relevant External Links for UPF3AP1 Gene

GeneLoc Exon Structure for
UPF3AP1

Expression for UPF3AP1 Gene

Products:

  1. Primer products for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for UPF3AP1 Gene

mRNA expression in normal human tissues for UPF3AP1 Gene
mRNA expression by GTEx for UPF3AP1 Gene
genes like me logo Genes that share expression patterns with UPF3AP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UPF3AP1 Gene

Orthologs for UPF3AP1 Gene

Evolution for UPF3AP1 Gene

ENSEMBL:
Gene Tree for UPF3AP1 (if available)
TreeFam:
Gene Tree for UPF3AP1 (if available)

No data available for Orthologs for UPF3AP1 Gene

Paralogs for UPF3AP1 Gene

No data available for Paralogs for UPF3AP1 Gene

Variants for UPF3AP1 Gene

Additional Variant Information for UPF3AP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UPF3AP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UPF3AP1 Gene

Disorders for UPF3AP1 Gene

No disorders were found for UPF3AP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for UPF3AP1 Gene

Publications for UPF3AP1 Gene

  1. Structure and evolution of the Smith-Magenis syndrome repeat gene clusters, SMS-REPs. (PMID: 11997339) Park SS … Lupski JR (Genome research 2002) 2 3

No data available for Mastermind for UPF3AP1 Gene

Products for UPF3AP1 Gene

Sources for UPF3AP1 Gene