Aliases for UNC5B-AS1 Gene

Data sources for UNC5B-AS1 Gene:

RNA type for UNC5B-AS1 Gene

lncRNA

Aliases for UNC5B-AS1 Gene

External Ids for UNC5B-AS1 Gene

Previous GeneCards Identifiers for UNC5B-AS1 Gene

  • GC10M072979

Summaries for UNC5B-AS1 Gene

GeneCards Summary for UNC5B-AS1 Gene

UNC5B-AS1 (UNC5B Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for UNC5B-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for UNC5B-AS1 Gene

Genomics for UNC5B-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for UNC5B-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around UNC5B-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for UNC5B-AS1 Gene

Latest Assembly
chr10:71,217,220-71,219,452
(GRCh38/hg38)
Size:
2,233 bases
Orientation:
Minus strand

Previous Assembly
chr10:72,976,981-72,977,985
(GRCh37/hg19 by Entrez Gene)
Size:
1,005 bases
Orientation:
Minus strand

chr10:72,976,981-72,977,985
(GRCh37/hg19 by Ensembl)
Size:
1,005 bases
Orientation:
Minus strand

Genomic View for UNC5B-AS1 Gene

Genes around UNC5B-AS1 on UCSC Golden Path with GeneCards custom track
UNC5B-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
UNC5B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UNC5B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UNC5B-AS1 Gene

Proteins for UNC5B-AS1 Gene

Post-translational modifications for UNC5B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UNC5B-AS1 Gene

Domains & Families for UNC5B-AS1 Gene

Gene Families for UNC5B-AS1 Gene

genes like me logo Genes that share domains with UNC5B-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for UNC5B-AS1 Gene

Function for UNC5B-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UNC5B-AS1 Gene

Localization for UNC5B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UNC5B-AS1 Gene

Pathways & Interactions for UNC5B-AS1 Gene

PathCards logo

SuperPathways for UNC5B-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for UNC5B-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for UNC5B-AS1 Gene

Drugs & Compounds for UNC5B-AS1 Gene

No Compound Related Data Available

Transcripts for UNC5B-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for UNC5B-AS1 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000117D76_9606 lncRNA 474 4

Ensembl: ENST00000449737 (view in UCSC) ,

LncBook: HSALNT0164110,

LNCipedia: UNC5B-AS1:4,

NONCODE: NONHSAT013874.2,

URS00004D16D8_9606 lncRNA 647 3

Ensembl: ENST00000447119 (view in UCSC) ,

LncBook: HSALNT0164113,

LNCipedia: UNC5B-AS1:2,

URS000075EE9C_9606 lncRNA 647 1

RefSeq: NR_038453,

URS00008B79A8_9606 lncRNA 665 3

LncBook: HSALNT0164116,

LNCipedia: UNC5B-AS1:1,

NONCODE: NONHSAT013876.2,

URS00008BD221_9606 lncRNA 613 3

LncBook: HSALNT0164114,

LNCipedia: UNC5B-AS1:3,

NONCODE: NONHSAT013875.2,

UNC5B-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for UNC5B-AS1 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for UNC5B-AS1 Gene

No ASD Table

Relevant External Links for UNC5B-AS1 Gene

GeneLoc Exon Structure for
UNC5B-AS1

Expression for UNC5B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for UNC5B-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for UNC5B-AS1 Gene

This gene is overexpressed in Heart - Atrial Appendage (x11.4) and Heart - Left Ventricle (x7.3).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for UNC5B-AS1

SOURCE GeneReport for Unigene cluster for UNC5B-AS1 Gene:

Hs.646725
genes like me logo Genes that share expression patterns with UNC5B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UNC5B-AS1 Gene

Orthologs for UNC5B-AS1 Gene

Evolution for UNC5B-AS1 Gene

ENSEMBL:
Gene Tree for UNC5B-AS1 (if available)
TreeFam:
Gene Tree for UNC5B-AS1 (if available)
Alliance of Genome Resources:
Additional Orthologs for UNC5B-AS1

No data available for Orthologs for UNC5B-AS1 Gene

Paralogs for UNC5B-AS1 Gene

No data available for Paralogs for UNC5B-AS1 Gene

Variants for UNC5B-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for UNC5B-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for UNC5B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UNC5B-AS1
Leiden Open Variation Database (LOVD)
UNC5B-AS1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UNC5B-AS1 Gene

Disorders for UNC5B-AS1 Gene

Additional Disease Information for UNC5B-AS1

No disorders were found for UNC5B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UNC5B-AS1 Gene

Publications for UNC5B-AS1 Gene

  1. Long non-coding RNA UASR1 promotes proliferation and migration of breast cancer cells through the AKT/mTOR pathway. (PMID: 31205563) Cao Z … Zhang X (Journal of Cancer 2019) 2 3
  2. The lncRNA UNC5B-AS1 promotes proliferation, migration, and invasion in papillary thyroid cancer cell lines. (PMID: 30805847) Wang Y … Wang O (Human cell 2019) 2 3
  3. UNC5B-AS1 promoted ovarian cancer progression by regulating the H3K27me on NDRG2 via EZH2. (PMID: 31903696) Wang H … Tan Y (Cell biology international 2020) 3
  4. Promoting effect of PAX5-activated lncRNA UASR1 on growth of colorectal cancer by regulating the mTOR pathway. (PMID: 32271416) Wang W … Wang HT (European review for medical and pharmacological sciences 2020) 3
  5. p53-inducible long non-coding RNA PICART1 mediates cancer cell proliferation and migration. (PMID: 28339031) Cao Y … Cao D (International journal of oncology 2017) 3

Products for UNC5B-AS1 Gene

Sources for UNC5B-AS1 Gene