UBTFL3 Gene (Pseudogene)

UBTF Like 3 (Pseudogene)

GC02P095644
GIFtS:
8
See more...

Aliases for UBTFL3 Gene

Aliases for UBTFL3 Gene

  • UBTF Like 3 (Pseudogene) 2 3 5
  • Upstream Binding Transcription Factor, RNA Polymerase I-Like 3 (Pseudogene) 2 3
  • Upstream Binding Transcription Factor, RNA Polymerase I-Like 3 2
  • Putative Upstream-Binding Factor 1-Like Protein 3/5 3
  • HMG Box-Containing Protein LOC129870 3
  • UBTFL5 3
  • UBTFL3 5

External Ids for UBTFL3 Gene

Previous GeneCards Identifiers for UBTFL3 Gene

  • GC02P095636
  • GC02P096273
  • GC02P096290
  • GC02P095628
  • GC02P095631
  • GC02P095639

Summaries for UBTFL3 Gene

GeneCards Summary for UBTFL3 Gene

UBTFL3 (UBTF Like 3 (Pseudogene)) is a Pseudogene.

Additional gene information for UBTFL3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for UBTFL3 Gene

Genomics for UBTFL3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for UBTFL3 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02J095633 Enhancer 0.3 Ensembl dbSUPER 0.4 +8.4 8388 2.8 ENSG00000275497 UBTFL3 TRIM43 ANKRD36C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around UBTFL3 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the UBTFL3 gene promoter:
  • AP-2rep
  • C/EBPalpha
  • En-1
  • NCX

Genomic Locations for UBTFL3 Gene

Genomic Locations for UBTFL3 Gene
chr2:95,625,213-95,626,404
(GRCh38/hg38)
Size:
1,192 bases
Orientation:
Plus strand
chr2:96,285,392-96,296,321
(GRCh37/hg19)
Size:
10,930 bases
Orientation:
Plus strand

Genomic View for UBTFL3 Gene

Genes around UBTFL3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBTFL3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBTFL3 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for UBTFL3 Gene

Proteins for UBTFL3 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for UBTFL3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBTFL3 Gene

Domains & Families for UBTFL3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for UBTFL3 Gene

Function for UBTFL3 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes for UBTFL3 Gene

GenomeRNAi human phenotypes for UBTFL3:
genes like me logo Genes that share phenotypes with UBTFL3: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBTFL3 Gene

Localization for UBTFL3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UBTFL3 Gene

Pathways & Interactions for UBTFL3 Gene

PathCards logo

SuperPathways for UBTFL3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for UBTFL3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for UBTFL3 Gene

Drugs & Compounds for UBTFL3 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for UBTFL3 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for UBTFL3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for UBTFL3 Gene

No ASD Table

Relevant External Links for UBTFL3 Gene

GeneLoc Exon Structure for
UBTFL3

Expression for UBTFL3 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for UBTFL3 Gene

mRNA expression in normal human tissues for UBTFL3 Gene
mRNA expression by GTEx for UBTFL3 Gene
genes like me logo Genes that share expression patterns with UBTFL3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBTFL3 Gene

Orthologs for UBTFL3 Gene

Evolution for UBTFL3 Gene

ENSEMBL:
Gene Tree for UBTFL3 (if available)
TreeFam:
Gene Tree for UBTFL3 (if available)

No data available for Orthologs for UBTFL3 Gene

Paralogs for UBTFL3 Gene

No data available for Paralogs for UBTFL3 Gene

Variants for UBTFL3 Gene

Additional Variant Information for UBTFL3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBTFL3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBTFL3 Gene

Disorders for UBTFL3 Gene

No disorders were found for UBTFL3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for UBTFL3 Gene

Publications for UBTFL3 Gene

  1. The full-ORF clone resource of the German cDNA Consortium. (PMID: 17974005) Bechtel S … Schupp I (BMC genomics 2007) 3
  2. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier LW … Wilson RK (Nature 2005) 3

ExternalLinks

View latest publications for UBTFL3 gene in Mastermind

Products for UBTFL3 Gene

Sources for UBTFL3 Gene