Aliases for UBQLN4P1 Gene

Aliases for UBQLN4P1 Gene

  • Ubiquilin 4 Pseudogene 1 2 3 5
  • Ubiquilin 4 Pseudogene 2
  • C3orf12 3
  • UBQLN4P 3

External Ids for UBQLN4P1 Gene

Previous HGNC Symbols for UBQLN4P1 Gene

  • UBQLN4P

Previous GeneCards Identifiers for UBQLN4P1 Gene

  • GC03M148702
  • GC03M146074

Summaries for UBQLN4P1 Gene

GeneCards Summary for UBQLN4P1 Gene

UBQLN4P1 (Ubiquilin 4 Pseudogene 1) is a Pseudogene.

Additional gene information for UBQLN4P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for UBQLN4P1 Gene

Genomics for UBQLN4P1 Gene

GeneHancer (GH) Regulatory Elements for UBQLN4P1 Gene

Promoters and enhancers for UBQLN4P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J148987 Promoter/Enhancer 0.5 Ensembl dbSUPER 500.7 +0.1 149 0.4 UBQLN4P1 GYG1 ENSG00000240521
GH03J149013 Enhancer 1.1 Ensembl ENCODE dbSUPER 12.5 -30.3 -30331 8.6 USF1 NCOR1 JUND FOS FOXA2 CTCF HDAC1 ETS1 EZH2 ZFHX2 GYG1 UBQLN4P1 HLTF piR-34822-233 lnc-CP-4
GH03J149042 Enhancer 0.7 Ensembl ENCODE 11.5 -55.9 -55923 2.5 FOS JUND PRDM1 ATF2 TBX21 JUNB HLF ATF7 ZNF384 FOXA1 HLTF HLTF-AS1 GYG1 UBQLN4P1 lnc-CP-4 piR-34822-233
GH03J149601 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 4.7 -626.0 -625951 27.8 ZBTB40 TCF12 SP1 NCOR1 JUND FOS EP300 ZIC2 KDM6A TCF7 WWTR1 WWTR1-AS1 UBQLN4P1 COMMD2 TM4SF18 TM4SF1 WWTR1-IT1 lnc-TM4SF4-3
GH03J149163 Enhancer 0.4 Ensembl 10.7 -175.6 -175551 0.6 SPI1 GABPA POLR2A MAX HPS3 GYG1 UBQLN4P1 lnc-HLTF-5 RF00994-690 CP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around UBQLN4P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for UBQLN4P1 Gene

Genomic Locations for UBQLN4P1 Gene
chr3:148,984,184-148,987,750
(GRCh38/hg38)
Size:
3,567 bases
Orientation:
Minus strand
chr3:148,701,962-148,705,477
(GRCh37/hg19)
Size:
3,516 bases
Orientation:
Minus strand

Genomic View for UBQLN4P1 Gene

Genes around UBQLN4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBQLN4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBQLN4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBQLN4P1 Gene

Proteins for UBQLN4P1 Gene

Post-translational modifications for UBQLN4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBQLN4P1 Gene

Domains & Families for UBQLN4P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for UBQLN4P1 Gene

Function for UBQLN4P1 Gene

Phenotypes From GWAS Catalog for UBQLN4P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBQLN4P1 Gene

Localization for UBQLN4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UBQLN4P1 Gene

Pathways & Interactions for UBQLN4P1 Gene

PathCards logo

SuperPathways for UBQLN4P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for UBQLN4P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for UBQLN4P1 Gene

Drugs & Compounds for UBQLN4P1 Gene

No Compound Related Data Available

Transcripts for UBQLN4P1 Gene

mRNA/cDNA for UBQLN4P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for UBQLN4P1 Gene

No ASD Table

Relevant External Links for UBQLN4P1 Gene

GeneLoc Exon Structure for
UBQLN4P1

Expression for UBQLN4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for UBQLN4P1 Gene

genes like me logo Genes that share expression patterns with UBQLN4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBQLN4P1 Gene

Orthologs for UBQLN4P1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for UBQLN4P1 Gene

Organism Taxonomy Gene Similarity Type Details
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.5534 30
sea squirt
(Ciona savignyi)
Ascidiacea Cin.11348 30
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.11348 30
Species where no ortholog for UBQLN4P1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for UBQLN4P1 Gene

ENSEMBL:
Gene Tree for UBQLN4P1 (if available)
TreeFam:
Gene Tree for UBQLN4P1 (if available)

Paralogs for UBQLN4P1 Gene

No data available for Paralogs for UBQLN4P1 Gene

Variants for UBQLN4P1 Gene

Additional Variant Information for UBQLN4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBQLN4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBQLN4P1 Gene

Disorders for UBQLN4P1 Gene

Additional Disease Information for UBQLN4P1

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)

No disorders were found for UBQLN4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBQLN4P1 Gene

Publications for UBQLN4P1 Gene

  1. Genetic associations of variants in genes encoding HIV-dependency factors required for HIV-1 infection. (PMID: 21083371) Chinn LW … O'Brien SJ (The Journal of infectious diseases 2010) 41 54

Products for UBQLN4P1 Gene

Sources for UBQLN4P1 Gene