Aliases for UBE2Q1-AS1 Gene

Subcategory (RNA class) for UBE2Q1-AS1 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for UBE2Q1-AS1 Gene

  • UBE2Q1 Antisense RNA 1 2 3 5
  • UBE2Q1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • UBE2Q1-AS1 2 5
  • NONHSAG003021.2 91
  • HSALNG0007414 164

External Ids for UBE2Q1-AS1 Gene

Summaries for UBE2Q1-AS1 Gene

GeneCards Summary for UBE2Q1-AS1 Gene

UBE2Q1-AS1 (UBE2Q1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for UBE2Q1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for UBE2Q1-AS1 Gene

Genomics for UBE2Q1-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for UBE2Q1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J154553 Enhancer 0.6 Ensembl ENCODE 600.7 +0.0 27 0.6 NFIC NFIB LCORL UBE2Q1-AS1 lnc-ADAR-2 IL6R SHE GBA MN308808 UBE2Q1
GH01J155123 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.2 +577.4 577433 14.7 CEBPG SP1 HNRNPL CREB1 GATAD2A ATF7 TEAD4 PRDM10 ZNF629 REST EFNA1 SLC50A1 MG604298 CLK2 GON4L KHDC4 UBAP2L ENSG00000271267 MSTO1 RUSC1-AS1
GH01J154965 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.2 +418.4 418445 12.2 RNF2 SP1 HNRNPL CREB1 GATAD2A TEAD4 PRDM10 ZNF629 REST RFX1 SHC1 CKS1B GON4L CLK2 UBAP2L KHDC4 ENSG00000271267 THBS3 RUSC1-AS1 KRTCAP2
GH01J155172 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.1 +621.8 621792 7.2 SP1 HNRNPL CREB1 GATAD2A CTCF ZBTB33 PRDM10 ZNF629 RFX1 NFKBIZ KRTCAP2 TRIM46 CLK2 KHDC4 GON4L ENSG00000271267 GBAP1 RUSC1-AS1 SHC1 THBS3
GH01J154606 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.7 +54.7 54749 4.3 ARHGAP35 CEBPG SP1 CREB1 TEAD4 PRDM10 REST IKZF1 KDM1A POLR2A ADAR CHRNB2 DPM3 UBE2Q1 ILF2 CHTOP UBE2Q1-AS1 ASH1L-AS1 DCST1 CLK2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around UBE2Q1-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for UBE2Q1-AS1 Gene

Genomic Locations for UBE2Q1-AS1 Gene
chr1:154,553,609-154,555,028
(GRCh38/hg38)
Size:
1,420 bases
Orientation:
Plus strand
chr1:154,526,085-154,527,493
(GRCh37/hg19)
Size:
1,409 bases
Orientation:
Plus strand

Genomic View for UBE2Q1-AS1 Gene

Genes around UBE2Q1-AS1 on UCSC Golden Path with GeneCards custom track
UBE2Q1-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
UBE2Q1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBE2Q1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBE2Q1-AS1 Gene

Proteins for UBE2Q1-AS1 Gene

Post-translational modifications for UBE2Q1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBE2Q1-AS1 Gene

Domains & Families for UBE2Q1-AS1 Gene

Gene Families for UBE2Q1-AS1 Gene

genes like me logo Genes that share domains with UBE2Q1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for UBE2Q1-AS1 Gene

Function for UBE2Q1-AS1 Gene

Phenotypes From GWAS Catalog for UBE2Q1-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBE2Q1-AS1 Gene

Localization for UBE2Q1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UBE2Q1-AS1 Gene

Pathways & Interactions for UBE2Q1-AS1 Gene

PathCards logo

SuperPathways for UBE2Q1-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for UBE2Q1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for UBE2Q1-AS1 Gene

Drugs & Compounds for UBE2Q1-AS1 Gene

No Compound Related Data Available

Transcripts for UBE2Q1-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for UBE2Q1-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00007E486A_9606 lncRNA 443 3

HGNC: 40722,

RefSeq: NR_046668,

LncBook: HSALNT0015556,

URS0000294268_9606 lncRNA 432 3

Ensembl: ENST00000441613 (view in UCSC) ,

LncBook: HSALNT0015555,

NONCODE: NONHSAT006626.2,

URS00009C16D6_9606 lncRNA 432 2

LncBook: HSALNT0015554,

NONCODE: NONHSAT149860.1,

UBE2Q1-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for UBE2Q1-AS1 Gene

No ASD Table

Relevant External Links for UBE2Q1-AS1 Gene

GeneLoc Exon Structure for
UBE2Q1-AS1

No data available for mRNA/cDNA for UBE2Q1-AS1 Gene

Expression for UBE2Q1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for UBE2Q1-AS1 Gene

genes like me logo Genes that share expression patterns with UBE2Q1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBE2Q1-AS1 Gene

Orthologs for UBE2Q1-AS1 Gene

Evolution for UBE2Q1-AS1 Gene

ENSEMBL:
Gene Tree for UBE2Q1-AS1 (if available)
TreeFam:
Gene Tree for UBE2Q1-AS1 (if available)

No data available for Orthologs for UBE2Q1-AS1 Gene

Paralogs for UBE2Q1-AS1 Gene

No data available for Paralogs for UBE2Q1-AS1 Gene

Variants for UBE2Q1-AS1 Gene

Additional dbSNP identifiers (rs#s) for UBE2Q1-AS1 Gene

Additional Variant Information for UBE2Q1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBE2Q1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBE2Q1-AS1 Gene

Disorders for UBE2Q1-AS1 Gene

No disorders were found for UBE2Q1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBE2Q1-AS1 Gene

Publications for UBE2Q1-AS1 Gene

No publications were found for UBE2Q1-AS1 Gene.

No data available for Mastermind for UBE2Q1-AS1 Gene

Products for UBE2Q1-AS1 Gene

Sources for UBE2Q1-AS1 Gene