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Aliases for UBDP1 Gene

Aliases for UBDP1 Gene

  • Ubiquitin D Pseudogene 1 2 3 5
  • DJ994E9.3 3

External Ids for UBDP1 Gene

Previous GeneCards Identifiers for UBDP1 Gene

  • GC00U914168
  • GC06U900624
  • GC06M029540
  • GC06M029435
  • GC06M029438
  • GC06M029440
  • GC06M029466
  • GC06M029467
  • GC06M029468
  • GC06M029469
  • GC06M029470
  • GC06M029471
  • GC06M029472
  • GC06M029474

Summaries for UBDP1 Gene

GeneCards Summary for UBDP1 Gene

UBDP1 (Ubiquitin D Pseudogene 1) is a Pseudogene.

Additional gene information for UBDP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBDP1 Gene

Genomics for UBDP1 Gene

GeneHancer (GH) Regulatory Elements for UBDP1 Gene

Promoters and enhancers for UBDP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J030065 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14.6 -597.0 -596999 3 ZFP64 DMAP1 YBX1 YY1 SLC30A9 E2F8 ZNF143 ZNF263 SP3 NFYC PPP1R11 TRIM39 ZNRD1 HCG4P3 TRIM26 PPP1R10 NRM MDC1 HLA-A RPL7P4
GH06J028586 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 14.6 +882.6 882641 1.9 FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 ZNF143 SP3 TRQ-TTG2-1 ZBED9 GPX6 GPX5 ZKSCAN3 ZNF311 ZNF603P ZSCAN12 ZNF90P2 KRT18P1
GH06J029467 Enhancer 0.2 FANTOM5 0.7 +2.1 2107 0.3 GC06M029436 OR10C1 ZFP57 MAS1L OR11A1 OR14J1 OR2W1 OR2J3 OR2B3 OR12D2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around UBDP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for UBDP1 Gene

Genomic Locations for UBDP1 Gene
chr6:29,464,596-29,469,806
(GRCh38/hg38)
Size:
5,211 bases
Orientation:
Minus strand
chr6:29,432,373-29,437,583
(GRCh37/hg19)
Size:
5,211 bases
Orientation:
Minus strand

Genomic View for UBDP1 Gene

Genes around UBDP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBDP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBDP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Function for UBDP1 Gene

Phenotypes From GWAS Catalog for UBDP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBDP1 Gene

Localization for UBDP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UBDP1 Gene

Pathways & Interactions for UBDP1 Gene

SuperPathways for UBDP1 Gene

No Data Available

Interacting Proteins for UBDP1 Gene

Gene Ontology (GO) - Biological Process for UBDP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBDP1 Gene

Drugs & Compounds for UBDP1 Gene

No Compound Related Data Available

Transcripts for UBDP1 Gene

mRNA/cDNA for UBDP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for UBDP1 Gene

No ASD Table

Relevant External Links for UBDP1 Gene

GeneLoc Exon Structure for
UBDP1
ECgene alternative splicing isoforms for
UBDP1

Expression for UBDP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UBDP1 Gene

mRNA differential expression in normal tissues according to GTEx for UBDP1 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of UBDP1 Gene:

UBDP1
genes like me logo Genes that share expression patterns with UBDP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBDP1 Gene

Orthologs for UBDP1 Gene

Evolution for UBDP1 Gene

ENSEMBL:
Gene Tree for UBDP1 (if available)
TreeFam:
Gene Tree for UBDP1 (if available)

No data available for Orthologs for UBDP1 Gene

Paralogs for UBDP1 Gene

No data available for Paralogs for UBDP1 Gene

Variants for UBDP1 Gene

Additional Variant Information for UBDP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBDP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBDP1 Gene

Disorders for UBDP1 Gene

No disorders were found for UBDP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for UBDP1 Gene

Publications for UBDP1 Gene

No publications were found for UBDP1 Gene.

Products for UBDP1 Gene

Sources for UBDP1 Gene

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