Aliases for TXNP2 Gene

Aliases for TXNP2 Gene

  • Thioredoxin Pseudogene 2 2 3 5
  • TXNP2 5

External Ids for TXNP2 Gene

Previous GeneCards Identifiers for TXNP2 Gene

  • GC01M068981

Summaries for TXNP2 Gene

GeneCards Summary for TXNP2 Gene

TXNP2 (Thioredoxin Pseudogene 2) is a Pseudogene.

Additional gene information for TXNP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TXNP2 Gene

Genomics for TXNP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TXNP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J068516 Enhancer 0.2 Ensembl 600.7 -1.7 -1658 0.4 TXNP2 lnc-DEPDC1-3 ENSG00000233589 DEPDC1 DEPDC1-AS1 piR-32810-002
GH01J068542 Enhancer 0.3 Ensembl 0.3 -28.1 -28058 0.4 JUND piR-32810-002 TXNP2 DEPDC1 DEPDC1-AS1
GH01J068527 Enhancer 0.2 ENCODE 0.4 -13.7 -13745 1.4 RPE65 TXNP2 piR-32810-002 DEPDC1 DEPDC1-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TXNP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TXNP2 Gene

Genomic Locations for TXNP2 Gene
chr1:68,513,844-68,514,743
(GRCh38/hg38)
Size:
900 bases
Orientation:
Minus strand
chr1:68,979,427-68,980,526
(GRCh37/hg19)
Size:
1,100 bases
Orientation:
Minus strand

Genomic View for TXNP2 Gene

Genes around TXNP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TXNP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TXNP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TXNP2 Gene

Proteins for TXNP2 Gene

No data available for DME Specific Peptides for TXNP2 Gene

Domains & Families for TXNP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TXNP2 Gene

Function for TXNP2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TXNP2 Gene

Localization for TXNP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TXNP2 Gene

Pathways & Interactions for TXNP2 Gene

PathCards logo

SuperPathways for TXNP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TXNP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TXNP2 Gene

Drugs & Compounds for TXNP2 Gene

No Compound Related Data Available

Transcripts for TXNP2 Gene

mRNA/cDNA for TXNP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TXNP2 Gene

No ASD Table

Relevant External Links for TXNP2 Gene

GeneLoc Exon Structure for
TXNP2

Expression for TXNP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TXNP2 Gene

genes like me logo Genes that share expression patterns with TXNP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TXNP2 Gene

Orthologs for TXNP2 Gene

Evolution for TXNP2 Gene

ENSEMBL:
Gene Tree for TXNP2 (if available)
TreeFam:
Gene Tree for TXNP2 (if available)

No data available for Orthologs for TXNP2 Gene

Paralogs for TXNP2 Gene

No data available for Paralogs for TXNP2 Gene

Variants for TXNP2 Gene

Additional Variant Information for TXNP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TXNP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TXNP2 Gene

Disorders for TXNP2 Gene

No disorders were found for TXNP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TXNP2 Gene

Publications for TXNP2 Gene

  1. A genome-wide survey of human thioredoxin and glutaredoxin family pseudogenes. (PMID: 11702225) Spyrou G … Miranda-Vizuete A (Human genetics 2001) 3

No data available for Mastermind for TXNP2 Gene

Products for TXNP2 Gene

Sources for TXNP2 Gene