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Aliases for TVP23CP1 Gene

Aliases for TVP23CP1 Gene

  • TVP23C Pseudogene 1 2 3 5
  • Trans-Golgi Network Vesicle Protein 23 Homolog C (S. Cerevisiae) Pseudogene 1 2

External Ids for TVP23CP1 Gene

Previous GeneCards Identifiers for TVP23CP1 Gene

  • GC07P090263

Summaries for TVP23CP1 Gene

GeneCards Summary for TVP23CP1 Gene

TVP23CP1 (TVP23C Pseudogene 1) is a Pseudogene.

Additional gene information for TVP23CP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TVP23CP1 Gene

Genomics for TVP23CP1 Gene

GeneHancer (GH) Regulatory Elements for TVP23CP1 Gene

Promoters and enhancers for TVP23CP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I090629 Enhancer 0.6 ENCODE 0.8 -2.4 -2394 0.1 SMARCA5 CTCF ZNF654 RAD21 RFX5 ZNF217 CTBP1 ZNF143 SMC3 DEK ENSG00000223969 CDK14 ENSG00000251154 CLDN12 TVP23CP1 GC07P090613
GH07I090623 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 -6.7 -6667 3.2 JUN CEBPB E2F4 EP300 SP1 JUND POLR2A FOS RCOR1 CHD2 ENSG00000223969 CDK14 ENSG00000251154 CLDN12 GTPBP10 TVP23CP1 GC07P090613
GH07I090621 Enhancer 1 FANTOM5 Ensembl ENCODE 0.4 -10.3 -10305 1.2 ZNF366 IKZF1 POU5F1 ZFP36 ETV6 ENSG00000223969 CDK14 STEAP2 GC07P090613 TVP23CP1
GH07I090612 Enhancer 0.9 Ensembl ENCODE 0.4 -18.6 -18605 1 PKNOX1 RB1 JUN RELA POLR2A NFATC1 ZNF143 ATF7 ETV6 IKZF2 GC07M090611 GC07P090613 TVP23CP1 CDK14
GH07I090655 Enhancer 0.7 Ensembl ENCODE 0.3 +23.8 23795 1.3 JUND POLR2A IKZF1 ATF7 IKZF2 RUNX3 ENSG00000223969 GTPBP10 GC07M090665 TVP23CP1 CDK14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TVP23CP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TVP23CP1 Gene

Genomic Locations for TVP23CP1 Gene
chr7:90,631,906-90,632,568
(GRCh38/hg38)
Size:
663 bases
Orientation:
Plus strand
chr7:90,261,220-90,261,882
(GRCh37/hg19)

Genomic View for TVP23CP1 Gene

Genes around TVP23CP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TVP23CP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TVP23CP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TVP23CP1 Gene

Proteins for TVP23CP1 Gene

Post-translational modifications for TVP23CP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TVP23CP1 Gene

Domains & Families for TVP23CP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TVP23CP1 Gene

Function for TVP23CP1 Gene

Phenotypes From GWAS Catalog for TVP23CP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TVP23CP1 Gene

Localization for TVP23CP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TVP23CP1 Gene

Pathways & Interactions for TVP23CP1 Gene

SuperPathways for TVP23CP1 Gene

No Data Available

Interacting Proteins for TVP23CP1 Gene

Gene Ontology (GO) - Biological Process for TVP23CP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TVP23CP1 Gene

Drugs & Compounds for TVP23CP1 Gene

No Compound Related Data Available

Transcripts for TVP23CP1 Gene

mRNA/cDNA for TVP23CP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TVP23CP1 Gene

No ASD Table

Relevant External Links for TVP23CP1 Gene

GeneLoc Exon Structure for
TVP23CP1
ECgene alternative splicing isoforms for
TVP23CP1

Expression for TVP23CP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TVP23CP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of TVP23CP1 Gene:

TVP23CP1
genes like me logo Genes that share expression patterns with TVP23CP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TVP23CP1 Gene

Orthologs for TVP23CP1 Gene

Evolution for TVP23CP1 Gene

ENSEMBL:
Gene Tree for TVP23CP1 (if available)
TreeFam:
Gene Tree for TVP23CP1 (if available)

No data available for Orthologs for TVP23CP1 Gene

Paralogs for TVP23CP1 Gene

No data available for Paralogs for TVP23CP1 Gene

Variants for TVP23CP1 Gene

Additional Variant Information for TVP23CP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TVP23CP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TVP23CP1 Gene

Disorders for TVP23CP1 Gene

No disorders were found for TVP23CP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TVP23CP1 Gene

Publications for TVP23CP1 Gene

No publications were found for TVP23CP1 Gene.

Products for TVP23CP1 Gene

Sources for TVP23CP1 Gene

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