Aliases for TUBBP2 Gene

Aliases for TUBBP2 Gene

  • Tubulin Beta Pseudogene 2 2 3 5
  • Tubulin, Beta Polypeptide Pseudogene 2 2 3
  • Tubulin, Beta Pseudogene 2 2
  • TUBBP2 5

External Ids for TUBBP2 Gene

Previous GeneCards Identifiers for TUBBP2 Gene

  • GC13U990031
  • GC13M040858
  • GC13M041957

Summaries for TUBBP2 Gene

GeneCards Summary for TUBBP2 Gene

TUBBP2 (Tubulin Beta Pseudogene 2) is a Pseudogene.

Additional gene information for TUBBP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TUBBP2 Gene

Genomics for TUBBP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TUBBP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J041386 Promoter 0.3 Ensembl 600.7 -1.1 -1118 0.2 TUBBP2 piR-46271-001 piR-48688-001 NAA16 piR-30188-054 MTRF1 RGCC
GH13J041383 Promoter 0.3 Ensembl 600.7 +1.6 1582 0.4 TUBBP2 piR-46271-001 piR-48688-001 RNU6-57P NAA16 RF00026-287 MTRF1 RGCC
GH13J041402 Enhancer 0.8 Ensembl ENCODE 0.4 -17.8 -17781 1.1 HNRNPL ZIC2 GABPA ZNF600 ZNF37A ZBED1 CUX1 POLR2A GABPB1 SKIL NAA16 RNU6-57P piR-30188-054 TUBBP2 RGCC MTRF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TUBBP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TUBBP2 Gene

Genomic Locations for TUBBP2 Gene
chr13:41,383,682-41,385,183
(GRCh38/hg38)
Size:
1,502 bases
Orientation:
Minus strand
chr13:41,957,824-41,959,319
(GRCh37/hg19)
Size:
1,496 bases
Orientation:
Minus strand

Genomic View for TUBBP2 Gene

Genes around TUBBP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TUBBP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TUBBP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TUBBP2 Gene

Proteins for TUBBP2 Gene

Post-translational modifications for TUBBP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUBBP2 Gene

Domains & Families for TUBBP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TUBBP2 Gene

Function for TUBBP2 Gene

Molecular function for TUBBP2 Gene

GENATLAS Biochemistry:
tubulin,beta polypeptide,pseudogene 2

Phenotypes From GWAS Catalog for TUBBP2 Gene

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TUBBP2 Gene

Localization for TUBBP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TUBBP2 Gene

Pathways & Interactions for TUBBP2 Gene

PathCards logo

SuperPathways for TUBBP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TUBBP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TUBBP2 Gene

Drugs & Compounds for TUBBP2 Gene

No Compound Related Data Available

Transcripts for TUBBP2 Gene

mRNA/cDNA for TUBBP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TUBBP2 Gene

No ASD Table

Relevant External Links for TUBBP2 Gene

GeneLoc Exon Structure for
TUBBP2

Expression for TUBBP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TUBBP2 Gene

genes like me logo Genes that share expression patterns with TUBBP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TUBBP2 Gene

Orthologs for TUBBP2 Gene

Evolution for TUBBP2 Gene

ENSEMBL:
Gene Tree for TUBBP2 (if available)
TreeFam:
Gene Tree for TUBBP2 (if available)

No data available for Orthologs for TUBBP2 Gene

Paralogs for TUBBP2 Gene

No data available for Paralogs for TUBBP2 Gene

Variants for TUBBP2 Gene

Additional Variant Information for TUBBP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TUBBP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TUBBP2 Gene

Disorders for TUBBP2 Gene

No disorders were found for TUBBP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TUBBP2 Gene

Publications for TUBBP2 Gene

  1. A contiguous linkage map of chromosome 13q with 39 distinct loci separated on average by 5.1 centimorgans. (PMID: 1685473) Bowcock AM … Cavalli-Sforza L (Genomics 1991) 2 3
  2. FBXW7 modulates cellular stress response and metastatic potential through ​HSF1 post-translational modification. (PMID: 25720964) Kourtis N … Aifantis I (Nature cell biology 2015) 3

Products for TUBBP2 Gene

Sources for TUBBP2 Gene