TUBB8P7 Gene (Pseudogene)

Tubulin Beta 8 Class VIII Pseudogene 7

GC16P090093
GIFtS:
8
See more...

Aliases for TUBB8P7 Gene

Aliases for TUBB8P7 Gene

  • Tubulin Beta 8 Class VIII Pseudogene 7 2 3 5
  • Tubulin, Beta 8 Class VIII Pseudogene 7 2
  • HSA16q24 Beta-Tubulin 4Q Pseudogene 3
  • TUBB8P7 5

External Ids for TUBB8P7 Gene

Previous GeneCards Identifiers for TUBB8P7 Gene

  • GC16P090159

Summaries for TUBB8P7 Gene

GeneCards Summary for TUBB8P7 Gene

TUBB8P7 (Tubulin Beta 8 Class VIII Pseudogene 7) is a Pseudogene.

Additional gene information for TUBB8P7 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TUBB8P7 Gene

Genomics for TUBB8P7 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for TUBB8P7 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH16J090093 Enhancer 0.3 Ensembl 607.4 +0.0 47 0.4 FOS TUBB8P7 PRDM7 lnc-PRDM7-3 piR-37193-002
GH16J090094 Enhancer 0.2 Ensembl 607.4 +1.4 1447 1.2 TUBB8P7 DEF8 GAS8 ENSG00000261172 DBNDD1 PRDM7 piR-37193-002
GH16J090081 Promoter/Enhancer 1.3 ENCODE CraniofacialAtlas 7 -10.9 -10934 1.3 GATAD2A CTCF PRDM10 ZNF629 IKZF1 ZNF692 TARDBP JUND FOXA1 LARP7 lnc-GAS8-6 DEF8 CDK10 ENSG00000261172 TUBB8P7 FAM157C FANCA PRDM7 lnc-PRDM7-3 DBNDD1
GH16J090069 Enhancer 0.3 Ensembl 8.3 -22.6 -22553 2.4 ATF2 KLF1 URAHP ENSG00000261172 GAS8 TUBB8P7 lnc-GAS8-6 PRDM7 DBNDD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TUBB8P7 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TUBB8P7 Gene

Genomic Locations for TUBB8P7 Gene
chr16:90,093,154-90,096,358
(GRCh38/hg38)
Size:
3,205 bases
Orientation:
Plus strand
chr16:90,159,562-90,162,762
(GRCh37/hg19)
Size:
3,201 bases
Orientation:
Plus strand

Genomic View for TUBB8P7 Gene

Genes around TUBB8P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TUBB8P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TUBB8P7 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TUBB8P7 Gene

Proteins for TUBB8P7 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TUBB8P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUBB8P7 Gene

Domains & Families for TUBB8P7 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TUBB8P7 Gene

Function for TUBB8P7 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for TUBB8P7 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TUBB8P7 Gene

Localization for TUBB8P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TUBB8P7 Gene

Pathways & Interactions for TUBB8P7 Gene

PathCards logo

SuperPathways for TUBB8P7 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TUBB8P7 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TUBB8P7 Gene

Drugs & Compounds for TUBB8P7 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TUBB8P7 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for TUBB8P7 Gene

2 NCBI additional mRNA sequence :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TUBB8P7 Gene

No ASD Table

Relevant External Links for TUBB8P7 Gene

GeneLoc Exon Structure for
TUBB8P7

Expression for TUBB8P7 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TUBB8P7 Gene

mRNA expression in normal human tissues for TUBB8P7 Gene
mRNA expression by GTEx for TUBB8P7 Gene

mRNA differential expression in normal tissues according to GTEx for TUBB8P7 Gene

This gene is overexpressed in Kidney - Cortex (x7.6) and Ovary (x5.9).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TUBB8P7

genes like me logo Genes that share expression patterns with TUBB8P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TUBB8P7 Gene

Orthologs for TUBB8P7 Gene

This gene was present in the common ancestor of animals.

Orthologs for TUBB8P7 Gene

Organism Taxonomy Gene Similarity Type Details
Platypus
(Ornithorhynchus anatinus)
 Mammalia TUBB8P7 31
  • 71 (a)
 OneToOne
Oppossum
(Monodelphis domestica)
 Mammalia TUBB8P7 31
  • 61 (a)
 OneToOne
Cow
(Bos Taurus)
 Mammalia -- 31
  • 49 (a)
 ManyToMany
Dog
(Canis familiaris)
 Mammalia -- 31
  • 16 (a)
 ManyToMany
-- 31
  • 13 (a)
 ManyToMany
Lizard
(Anolis carolinensis)
 Reptilia -- 31
  • 52 (a)
 ManyToMany
Zebrafish
(Danio rerio)
 Actinopterygii tubb4b 31 31 31
  • 51 (a)
 ManyToMany
zgc:65894 31
  • 51 (a)
 ManyToMany
Fruit Fly
(Drosophila melanogaster)
 Insecta betaTub56D 31
  • 47 (a)
 OneToMany
Sea Squirt
(Ciona savignyi)
 Ascidiacea CSA.7878 31
  • 52 (a)
 ManyToMany
CSA.4227 31
  • 52 (a)
 ManyToMany
Species where no ortholog for TUBB8P7 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for TUBB8P7 Gene

ENSEMBL:
Gene Tree for TUBB8P7 (if available)
TreeFam:
Gene Tree for TUBB8P7 (if available)

Paralogs for TUBB8P7 Gene

No data available for Paralogs for TUBB8P7 Gene

Variants for TUBB8P7 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Additional Variant Information for TUBB8P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TUBB8P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TUBB8P7 Gene

Disorders for TUBB8P7 Gene

Additional Disease Information for TUBB8P7

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for TUBB8P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TUBB8P7 Gene

Publications for TUBB8P7 Gene

  1. A cascade of complex subtelomeric duplications during the evolution of the hominoid and Old World monkey genomes. (PMID: 11731935) van Geel M … de Jong PJ (American journal of human genetics 2002) 3

ExternalLinks

View latest publications for TUBB8P7 gene in Mastermind

Products for TUBB8P7 Gene

Sources for TUBB8P7 Gene