Aliases for TUBB7P Gene

Aliases for TUBB7P Gene

  • Tubulin Beta 7 Pseudogene 2 3 5
  • Tubulin, Beta Polypeptide 4, Member Q, Pseudogene 2 3
  • Tubulin, Beta Polypeptide 4, Member Q 2
  • Putative Tubulin Beta-4q Chain 3
  • Tubulin, Beta 7, Pseudogene 2
  • TUBB4Q 3
  • TUBB7P 5

External Ids for TUBB7P Gene

Previous HGNC Symbols for TUBB7P Gene

  • TUBB4Q

Previous GeneCards Identifiers for TUBB7P Gene

  • GC04M190906

Summaries for TUBB7P Gene

GeneCards Summary for TUBB7P Gene

TUBB7P (Tubulin Beta 7 Pseudogene) is a Pseudogene. Among its related pathways are G-Beta Gamma Signaling and Remodeling of Adherens Junctions.

Additional gene information for TUBB7P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TUBB7P Gene

Genomics for TUBB7P Gene

Genomic Locations for TUBB7P Gene

Latest Assembly
chr4:189,982,335-189,984,929
(GRCh38/hg38)
Size:
2,595 bases
Orientation:
Minus strand

Previous Assembly
chr4:190,903,490-190,906,084
(GRCh37/hg19 by Entrez Gene)
Size:
2,595 bases
Orientation:
Minus strand

chr4:190,903,678-190,906,026
(GRCh37/hg19 by Ensembl)
Size:
2,349 bases
Orientation:
Minus strand

Alternative Locations (GRCh38/hg38)

  • chr4(ALT_REF_LOCI_2):319,866-322,460 (-)
  • chr4(PATCHES):75,265-77,859 (-)

Genomic View for TUBB7P Gene

Genes around TUBB7P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TUBB7P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TUBB7P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TUBB7P Gene

No data available for GeneHancer (GH) Regulatory Elements for TUBB7P Gene

Proteins for TUBB7P Gene

Post-translational modifications for TUBB7P Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUBB7P Gene

Domains & Families for TUBB7P Gene

Gene Families for TUBB7P Gene

HGNC:

Suggested Antigen Peptide Sequences for TUBB7P Gene

GenScript: Design optimal peptide antigens:
  • Putative tubulin beta-4q chain (TBB4Q_HUMAN)
genes like me logo Genes that share domains with TUBB7P: view

No data available for Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TUBB7P Gene

Function for TUBB7P Gene

Phenotypes From GWAS Catalog for TUBB7P Gene

genes like me logo Genes that share phenotypes with TUBB7P: view

Animal Models for research

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TUBB7P Gene

Localization for TUBB7P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TUBB7P Gene

Pathways & Interactions for TUBB7P Gene

PathCards logo

SuperPathways for TUBB7P Gene

SuperPathway Contained pathways
1 Development Slit-Robo signaling
.44
.44
.30
2 Sertoli-Sertoli Cell Junction Dynamics
.38
.38
.36
3 G-Beta Gamma Signaling
.32
.30
4 Cytoskeleton remodeling Neurofilaments
.32
.32
5 Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
.97
genes like me logo Genes that share pathways with TUBB7P: view

Pathways by source for TUBB7P Gene

10 GeneGo (Thomson Reuters) pathways for TUBB7P Gene
  • Cell adhesion Gap junctions
  • Cell cycle_Spindle assembly and chromosome separation
  • Cytoskeleton remodeling Keratin filaments
  • Cytoskeleton remodeling Neurofilaments
  • Cytoskeleton remodeling Reverse signaling by ephrin B
11 Qiagen pathways for TUBB7P Gene
  • 14-3-3 Induced Intracellular Signaling
  • Breast Cancer Regulation by Stathmin1
  • Epithelial Adherens Junctions
  • Epithelial Tight Junctions
  • Germ Cell-Sertoli Cell Junction Dynamics

Gene Ontology (GO) - Biological Process for TUBB7P Gene

None

No data available for Interacting Proteins and SIGNOR curated interactions for TUBB7P Gene

Drugs & Compounds for TUBB7P Gene

No Compound Related Data Available

Transcripts for TUBB7P Gene

mRNA/cDNA for TUBB7P Gene

1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR products for research

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for TUBB7P

Alternative Splicing Database (ASD) splice patterns (SP) for TUBB7P Gene

No ASD Table

Relevant External Links for TUBB7P Gene

GeneLoc Exon Structure for
TUBB7P

Expression for TUBB7P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TUBB7P Gene

mRNA differential expression in normal tissues according to GTEx for TUBB7P Gene

This gene is overexpressed in Testis (x4.7).

Protein differential expression in normal tissues from HIPED for TUBB7P Gene

This gene is overexpressed in Brain (46.7) and Heart (16.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for TUBB7P Gene



Protein tissue co-expression partners for TUBB7P Gene

- Elite partner

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TUBB7P

SOURCE GeneReport for Unigene cluster for TUBB7P Gene:

Hs.351544
genes like me logo Genes that share expression patterns with TUBB7P: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TUBB7P Gene

Orthologs for TUBB7P Gene

Evolution for TUBB7P Gene

ENSEMBL:
Gene Tree for TUBB7P (if available)
TreeFam:
Gene Tree for TUBB7P (if available)
Alliance of Genome Resources:
Additional Orthologs for TUBB7P

No data available for Orthologs for TUBB7P Gene

Paralogs for TUBB7P Gene

No data available for Paralogs for TUBB7P Gene

Variants for TUBB7P Gene

Additional Variant Information for TUBB7P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TUBB7P
Leiden Open Variation Database (LOVD)
TUBB7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TUBB7P Gene

Disorders for TUBB7P Gene

Additional Disease Information for TUBB7P

No disorders were found for TUBB7P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TUBB7P Gene

Publications for TUBB7P Gene

  1. Identification of a novel beta-tubulin subfamily with one member (TUBB4Q) located near the telomere of chromosome region 4q35. (PMID: 10828619) van Geel M … Frants RR (Cytogenetics and cell genetics 2000) 2 3
  2. PLEKHA4/kramer Attenuates Dishevelled Ubiquitination to Modulate Wnt and Planar Cell Polarity Signaling. (PMID: 31091453) Shami Shah A … Baskin JM (Cell reports 2019) 3
  3. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3
  4. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin EL … Gygi SP (Cell 2015) 3
  5. Profiling of Parkin-binding partners using tandem affinity purification. (PMID: 24244333) Zanon A … Pichler I (PloS one 2013) 3

Products for TUBB7P Gene

Sources for TUBB7P Gene