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Aliases for TUBB4BP1 Gene
Aliases for TUBB4BP1 Gene
External Ids for TUBB4BP1 Gene
- HGNC: 42180
- NCBI Entrez Gene: 106478981
- Ensembl: ENSG00000255988
Previous GeneCards Identifiers for TUBB4BP1 Gene
- GC12M025594
Summaries for TUBB4BP1 Gene
GeneCards Summary for TUBB4BP1 Gene
TUBB4BP1 (TUBB4B Pseudogene 1) is a Pseudogene.
Additional gene information for TUBB4BP1 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TUBB4BP1 Gene
Genomics for TUBB4BP1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for TUBB4BP1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH12J025435 | Promoter/Enhancer | 1 | Ensembl ENCODE | 0.7 | +4.6 | 4581 | 1.2 | CTCF CEBPB REST TRIM22 SMC3 RAD21 ZNF2 MAFK MAFF L3MBTL2 | FAM133GP lnc-KRAS-3 RASSF8 RASSF8-AS1 TUBB4BP1 HSALNG0089922 KRAS LMNTD1 | |
| GH12J025457 | Enhancer | 1 | Ensembl ENCODE | 0.4 | -17.8 | -17829 | 3 | BRCA1 ZEB1 ELF1 CEBPB ELK1 MBD2 CUX1 ZNF639 MAX EP300 | HSALNG0089925 TUBB4BP1 HSALNG0089922 LMNTD1 KRAS |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around TUBB4BP1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for TUBB4BP1 Gene
Latest Assembly
- chr12:25,440,875-25,441,052
- (GRCh38/hg38)
- Size:
- 178 bases
- Orientation:
- Minus strand
Previous Assembly
- chr12:25,593,809-25,593,986
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 178 bases
- Orientation:
- Minus strand
- chr12:25,593,809-25,593,986
- (GRCh37/hg19 by Ensembl)
- Size:
- 178 bases
- Orientation:
- Minus strand
Genomic View for TUBB4BP1 Gene
Genes around TUBB4BP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 12p12.1 by HGNC
- 12p12.1 by Entrez Gene
- 12p12.1 by Ensembl
TUBB4BP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for TUBB4BP1 Gene
Proteins for TUBB4BP1 Gene
Post-translational modifications for TUBB4BP1 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for TUBB4BP1
- Origene Custom Protein Services for TUBB4BP1
Assay products for research
No data available for DME Specific Peptides for TUBB4BP1 Gene
Domains & Families for TUBB4BP1 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TUBB4BP1 Gene
Function for TUBB4BP1 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Browse CRISPR knockouts for TUBB4BP1
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TUBB4BP1 Gene
Localization for TUBB4BP1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TUBB4BP1 Gene
Transcripts for TUBB4BP1 Gene
mRNA/cDNA for TUBB4BP1 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000545422 178 nts (view in UCSC)
CRISPR products for research
- Browse CRISPR knockouts for TUBB4BP1
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for TUBB4BP1 Gene
- GeneLoc Exon Structure for
- TUBB4BP1
Expression for TUBB4BP1 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TUBB4BP1 Gene
Orthologs for TUBB4BP1 Gene
No data available for Orthologs for TUBB4BP1 Gene
Paralogs for TUBB4BP1 Gene
No data available for Paralogs for TUBB4BP1 Gene
Variants for TUBB4BP1 Gene
Additional Variant Information for TUBB4BP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- TUBB4BP1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TUBB4BP1 Gene
Disorders for TUBB4BP1 Gene
No disorders were found for TUBB4BP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TUBB4BP1 Gene
Publications for TUBB4BP1 Gene
No publications were found for TUBB4BP1 Gene.
No data available for Mastermind for TUBB4BP1 Gene
Products for TUBB4BP1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for TUBB4BP1
- Origene Custom Protein Services for TUBB4BP1
- Browse OriGene Inhibitory RNA Products For TUBB4BP1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for TUBB4BP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For TUBB4BP1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for TUBB4BP1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for TUBB4BP1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for TUBB4BP1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for TUBB4BP1
Sources for TUBB4BP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB