TUBB4BP1 Gene (Pseudogene)

TUBB4B Pseudogene 1

GC12M025440
GIFtS:
5
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Aliases for TUBB4BP1 Gene

Aliases for TUBB4BP1 Gene

  • TUBB4B Pseudogene 1 2 3
  • Tubulin Beta 4B Class IVb Pseudogene 1 2 3 5
  • Tubulin, Beta 4B Class IVb Pseudogene 1 2
  • TUBB4BP1 5

External Ids for TUBB4BP1 Gene

Previous GeneCards Identifiers for TUBB4BP1 Gene

  • GC12M025594

Summaries for TUBB4BP1 Gene

GeneCards Summary for TUBB4BP1 Gene

TUBB4BP1 (TUBB4B Pseudogene 1) is a Pseudogene.

Additional gene information for TUBB4BP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TUBB4BP1 Gene

Genomics for TUBB4BP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for TUBB4BP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12J025435 Promoter/Enhancer 1 Ensembl ENCODE 0.7 +4.6 4581 1.2 CTCF ZNF512 JUND FOXA1 PRDM1 REST RAD21 TRIM22 CEBPB ZNF10 FAM133GP lnc-KRAS-3 RASSF8 RASSF8-AS1 TUBB4BP1 KRAS LMNTD1
GH12J025457 Enhancer 0.9 ENCODE 0.4 -17.7 -17735 2.9 CREB1 PRDM10 ZNF629 ZNF692 ZHX2 JUND PRDM1 PATZ1 ZNF501 ZNF600 piR-31534-128 TUBB4BP1 LMNTD1 KRAS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TUBB4BP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TUBB4BP1 Gene

Genomic Locations for TUBB4BP1 Gene
chr12:25,440,875-25,441,052
(GRCh38/hg38)
Size:
178 bases
Orientation:
Minus strand
chr12:25,593,809-25,593,986
(GRCh37/hg19)
Size:
178 bases
Orientation:
Minus strand

Genomic View for TUBB4BP1 Gene

Genes around TUBB4BP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TUBB4BP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TUBB4BP1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TUBB4BP1 Gene

Proteins for TUBB4BP1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TUBB4BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUBB4BP1 Gene

Domains & Families for TUBB4BP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TUBB4BP1 Gene

Function for TUBB4BP1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TUBB4BP1 Gene

Localization for TUBB4BP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TUBB4BP1 Gene

Pathways & Interactions for TUBB4BP1 Gene

PathCards logo

SuperPathways for TUBB4BP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TUBB4BP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TUBB4BP1 Gene

Drugs & Compounds for TUBB4BP1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TUBB4BP1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for TUBB4BP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TUBB4BP1 Gene

No ASD Table

Relevant External Links for TUBB4BP1 Gene

GeneLoc Exon Structure for
TUBB4BP1

Expression for TUBB4BP1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TUBB4BP1 Gene

mRNA expression in normal human tissues for TUBB4BP1 Gene
mRNA expression by GTEx for TUBB4BP1 Gene
genes like me logo Genes that share expression patterns with TUBB4BP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TUBB4BP1 Gene

Orthologs for TUBB4BP1 Gene

Evolution for TUBB4BP1 Gene

ENSEMBL:
Gene Tree for TUBB4BP1 (if available)
TreeFam:
Gene Tree for TUBB4BP1 (if available)

No data available for Orthologs for TUBB4BP1 Gene

Paralogs for TUBB4BP1 Gene

No data available for Paralogs for TUBB4BP1 Gene

Variants for TUBB4BP1 Gene

Additional Variant Information for TUBB4BP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TUBB4BP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TUBB4BP1 Gene

Disorders for TUBB4BP1 Gene

No disorders were found for TUBB4BP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TUBB4BP1 Gene

Publications for TUBB4BP1 Gene

No publications were found for TUBB4BP1 Gene.

No data available for Mastermind for TUBB4BP1 Gene

Products for TUBB4BP1 Gene

Sources for TUBB4BP1 Gene