Aliases for TUBAP11 Gene

Aliases for TUBAP11 Gene

  • Tubulin Alpha Pseudogene 11 2 3
  • Tubulin, Alpha 1b (TUBA1B) Pseudogene 5
  • AC018868.2 5

External Ids for TUBAP11 Gene

Summaries for TUBAP11 Gene

GeneCards Summary for TUBAP11 Gene

TUBAP11 (Tubulin Alpha Pseudogene 11) is a Pseudogene.

Additional gene information for TUBAP11 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TUBAP11 Gene

Genomics for TUBAP11 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TUBAP11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J034850 Enhancer 0.2 Ensembl 600.7 -1.2 -1217 1.4 TUBAP11 lnc-ACTC1-1 ACTC1 AQR
GH15J034836 Enhancer 0.8 Ensembl ENCODE 5.3 +13.0 13009 1.5 JUND UBTF SMARCC1 SMARCC2 NFE2 FOS OSR2 JUN FOSL1 EHMT2 ACTC1 ENSG00000250007 GJD2 TUBAP11 ENSG00000259181 RF00017-1748 lnc-NUTM1-8 AQR
GH15J034852 Enhancer 0.6 Ensembl 0.7 -2.7 -2717 0.8 CTCF SP1 YY1 GABPA ZBTB33 NR2F2 ZNF384 HNF4A RXRA MAX ZNF770 TUBAP11 lnc-ACTC1-1 ACTC1 AQR
GH15J034854 Enhancer 0.7 Ensembl ENCODE 0.4 -5.1 -5058 1.8 ZNF692 CEBPB JUND FOS ZBTB48 STAT3 TCF7L2 ZSCAN21 ACTC1 ENSG00000250007 GJD2 ENSG00000259181 ZNF770 TUBAP11 lnc-ACTC1-1 AQR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TUBAP11 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TUBAP11 Gene

Genomic Locations for TUBAP11 Gene
chr15:34,848,983-34,850,484
(GRCh38/hg38)
Size:
1,502 bases
Orientation:
Minus strand
chr15:35,141,184-35,142,685
(GRCh37/hg19)
Size:
1,502 bases
Orientation:
Minus strand

Genomic View for TUBAP11 Gene

Genes around TUBAP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TUBAP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TUBAP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TUBAP11 Gene

Proteins for TUBAP11 Gene

Post-translational modifications for TUBAP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUBAP11 Gene

Domains & Families for TUBAP11 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TUBAP11 Gene

Function for TUBAP11 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TUBAP11 Gene

Localization for TUBAP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TUBAP11 Gene

Pathways & Interactions for TUBAP11 Gene

PathCards logo

SuperPathways for TUBAP11 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TUBAP11 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TUBAP11 Gene

Drugs & Compounds for TUBAP11 Gene

No Compound Related Data Available

Transcripts for TUBAP11 Gene

mRNA/cDNA for TUBAP11 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TUBAP11 Gene

No ASD Table

Relevant External Links for TUBAP11 Gene

GeneLoc Exon Structure for
TUBAP11

Expression for TUBAP11 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TUBAP11 Gene

Orthologs for TUBAP11 Gene

Evolution for TUBAP11 Gene

ENSEMBL:
Gene Tree for TUBAP11 (if available)
TreeFam:
Gene Tree for TUBAP11 (if available)

No data available for Orthologs for TUBAP11 Gene

Paralogs for TUBAP11 Gene

No data available for Paralogs for TUBAP11 Gene

Variants for TUBAP11 Gene

Additional Variant Information for TUBAP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TUBAP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TUBAP11 Gene

Disorders for TUBAP11 Gene

No disorders were found for TUBAP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TUBAP11 Gene

Publications for TUBAP11 Gene

No publications were found for TUBAP11 Gene.

No data available for Mastermind for TUBAP11 Gene

Products for TUBAP11 Gene

Sources for TUBAP11 Gene