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Aliases for TTLL7-IT1 Gene

Subcategory (RNA class) for TTLL7-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTLL7-IT1 Gene

  • TTLL7 Intronic Transcript 1 2 3 5
  • TTLL7 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for TTLL7-IT1 Gene

Previous GeneCards Identifiers for TTLL7-IT1 Gene

  • GC00U933215
  • GC01M084445

Summaries for TTLL7-IT1 Gene

GeneCards Summary for TTLL7-IT1 Gene

TTLL7-IT1 (TTLL7 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TTLL7-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTLL7-IT1 Gene

Genomics for TTLL7-IT1 Gene

GeneHancer (GH) Regulatory Elements for TTLL7-IT1 Gene

Promoters and enhancers for TTLL7-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I083997 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 -14.7 -14676 2.1 CLOCK SIN3A ZNF2 ZNF213 E2F8 SP3 SREBF1 ZNF610 GLIS1 NBN TTLL7 TTLL7-IT1
GH01I083956 Enhancer 0.7 dbSUPER 0.3 +21.6 21630 12.5 GFI1B MAFG CEBPB FEZF1 ZEB2 CEBPG ATF2 ATF4 JUND PRDM6 TTLL7 PIR50322 TTLL7-IT1
GH01I083949 Enhancer 0.6 dbSUPER 0.3 +31.4 31368 6.4 PKNOX1 FOXA2 ZBTB11 MAFG CTBP1 PRDM6 BCL6B ZNF350 HNF4A NFE2 TTLL7 PRKACB PIR50322 TTLL7-IT1
GH01I083974 Enhancer 0.4 dbSUPER 0.4 +8.9 8902 1.2 POLR2A ZSCAN4 LINC01725 TTLL7 TTLL7-IT1 PIR50322
GH01I083969 Enhancer 0.2 dbSUPER 0.4 +13.4 13368 1.9 TTLL7 TTLL7-IT1 PIR50322
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TTLL7-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TTLL7-IT1 Gene

Genomic Locations for TTLL7-IT1 Gene
chr1:83,979,118-83,984,300
(GRCh38/hg38)
Size:
5,183 bases
Orientation:
Minus strand
chr1:84,444,801-84,449,983
(GRCh37/hg19)

Genomic View for TTLL7-IT1 Gene

Genes around TTLL7-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTLL7-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTLL7-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for TTLL7-IT1 Gene

Proteins for TTLL7-IT1 Gene

Post-translational modifications for TTLL7-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTLL7-IT1 Gene

Domains & Families for TTLL7-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTLL7-IT1 Gene

Function for TTLL7-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTLL7-IT1 Gene

Localization for TTLL7-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TTLL7-IT1 Gene

Pathways & Interactions for TTLL7-IT1 Gene

SuperPathways for TTLL7-IT1 Gene

No Data Available

Interacting Proteins for TTLL7-IT1 Gene

Gene Ontology (GO) - Biological Process for TTLL7-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTLL7-IT1 Gene

Drugs & Compounds for TTLL7-IT1 Gene

No Compound Related Data Available

Transcripts for TTLL7-IT1 Gene

mRNA/cDNA for TTLL7-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TTLL7-IT1 Gene

No ASD Table

Relevant External Links for TTLL7-IT1 Gene

GeneLoc Exon Structure for
TTLL7-IT1
ECgene alternative splicing isoforms for
TTLL7-IT1

Expression for TTLL7-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TTLL7-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for TTLL7-IT1 Gene

This gene is overexpressed in Testis (x5.1).
genes like me logo Genes that share expression patterns with TTLL7-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TTLL7-IT1 Gene

Orthologs for TTLL7-IT1 Gene

Evolution for TTLL7-IT1 Gene

ENSEMBL:
Gene Tree for TTLL7-IT1 (if available)
TreeFam:
Gene Tree for TTLL7-IT1 (if available)

No data available for Orthologs for TTLL7-IT1 Gene

Paralogs for TTLL7-IT1 Gene

No data available for Paralogs for TTLL7-IT1 Gene

Variants for TTLL7-IT1 Gene

Additional Variant Information for TTLL7-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TTLL7-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TTLL7-IT1 Gene

Disorders for TTLL7-IT1 Gene

Additional Disease Information for TTLL7-IT1

No disorders were found for TTLL7-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTLL7-IT1 Gene

Publications for TTLL7-IT1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for TTLL7-IT1 Gene

Sources for TTLL7-IT1 Gene

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