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Aliases for TTLL11-IT1 Gene

Subcategory (RNA class) for TTLL11-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTLL11-IT1 Gene

  • TTLL11 Intronic Transcript 1 2 3 5
  • TTLL11 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • Chromosome 9 Open Reading Frame 148 2
  • C9orf148 3

External Ids for TTLL11-IT1 Gene

Previous HGNC Symbols for TTLL11-IT1 Gene

  • C9orf148

Previous GeneCards Identifiers for TTLL11-IT1 Gene

  • GC09M124650

Summaries for TTLL11-IT1 Gene

GeneCards Summary for TTLL11-IT1 Gene

TTLL11-IT1 (TTLL11 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TTLL11-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTLL11-IT1 Gene

Genomics for TTLL11-IT1 Gene

GeneHancer (GH) Regulatory Elements for TTLL11-IT1 Gene

Promoters and enhancers for TTLL11-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I121962 Enhancer 0.7 Ensembl ENCODE 550.8 0.0 -25 2.3 JUND POLR2A JUN PRDM10 TTLL11-IT1 ENSG00000261534 TTLL11
GH09I122203 Enhancer 0.3 ENCODE 4.8 -240.6 -240609 1 EGR2 LHX6 TTLL11-IT1 GC09P122163
GH09I121976 Enhancer 0.9 FANTOM5 ENCODE 0.4 -13.3 -13296 0.3 ATF1 ZBTB21 ATF2 MITF JUND TARDBP ZNF629 CREB1 FOS CREM TTLL11-IT1 TTLL11
GH09I121975 Enhancer 0.8 ENCODE 0.4 -12.3 -12341 1.6 ELF3 ATF1 FOXA2 ZFP64 ARID4B YY1 FOS CREM MIXL1 RXRA ENSG00000261534 TTLL11-IT1 TTLL11
GH09I121972 Enhancer 0.8 Ensembl ENCODE 0.4 -9.4 -9395 2.2 STAT1 ZNF146 MXI1 RFX1 JUN RFX5 E2F1 JUND GATA3 POLR2A ENSG00000261534 TTLL11-IT1 TTLL11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TTLL11-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TTLL11-IT1 Gene

Genomic Locations for TTLL11-IT1 Gene
chr9:121,884,611-121,963,719
(GRCh38/hg38)
Size:
79,109 bases
Orientation:
Minus strand
chr9:124,646,890-124,725,998
(GRCh37/hg19)

Genomic View for TTLL11-IT1 Gene

Genes around TTLL11-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTLL11-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTLL11-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for TTLL11-IT1 Gene

Proteins for TTLL11-IT1 Gene

Post-translational modifications for TTLL11-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTLL11-IT1 Gene

Domains & Families for TTLL11-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTLL11-IT1 Gene

Function for TTLL11-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTLL11-IT1 Gene

Localization for TTLL11-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TTLL11-IT1 Gene

Pathways & Interactions for TTLL11-IT1 Gene

SuperPathways for TTLL11-IT1 Gene

No Data Available

Interacting Proteins for TTLL11-IT1 Gene

Gene Ontology (GO) - Biological Process for TTLL11-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTLL11-IT1 Gene

Drugs & Compounds for TTLL11-IT1 Gene

No Compound Related Data Available

Transcripts for TTLL11-IT1 Gene

mRNA/cDNA for TTLL11-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TTLL11-IT1 Gene

No ASD Table

Relevant External Links for TTLL11-IT1 Gene

GeneLoc Exon Structure for
TTLL11-IT1
ECgene alternative splicing isoforms for
TTLL11-IT1

Expression for TTLL11-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TTLL11-IT1 Gene

genes like me logo Genes that share expression patterns with TTLL11-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TTLL11-IT1 Gene

Orthologs for TTLL11-IT1 Gene

Evolution for TTLL11-IT1 Gene

ENSEMBL:
Gene Tree for TTLL11-IT1 (if available)
TreeFam:
Gene Tree for TTLL11-IT1 (if available)

No data available for Orthologs for TTLL11-IT1 Gene

Paralogs for TTLL11-IT1 Gene

No data available for Paralogs for TTLL11-IT1 Gene

Variants for TTLL11-IT1 Gene

Additional Variant Information for TTLL11-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TTLL11-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TTLL11-IT1 Gene

Disorders for TTLL11-IT1 Gene

Additional Disease Information for TTLL11-IT1

No disorders were found for TTLL11-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTLL11-IT1 Gene

Publications for TTLL11-IT1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for TTLL11-IT1 Gene

Sources for TTLL11-IT1 Gene

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