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Aliases for TTC4P1 Gene

Aliases for TTC4P1 Gene

  • Tetratricopeptide Repeat Domain 4 Pseudogene 1 2 3 5
  • Tetratricopeptide Repeat Domain 4, Pseudogene 2 3
  • TTC4P 3

External Ids for TTC4P1 Gene

Previous HGNC Symbols for TTC4P1 Gene

  • TTC4P

Previous GeneCards Identifiers for TTC4P1 Gene

  • GC07M046040
  • GC07M045924

Summaries for TTC4P1 Gene

GeneCards Summary for TTC4P1 Gene

TTC4P1 (Tetratricopeptide Repeat Domain 4 Pseudogene 1) is a Pseudogene.

Additional gene information for TTC4P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTC4P1 Gene

Genomics for TTC4P1 Gene

GeneHancer (GH) Regulatory Elements for TTC4P1 Gene

Promoters and enhancers for TTC4P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I046000 Promoter 0.5 Ensembl 550.8 +0.1 77 0.2 TTC4P1 RNU7-76P ENSG00000237471 FTLP15 ENSG00000229628 LOC105375264 GC07M045993 LOC102723446
GH07I045918 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 15.2 +79.1 79063 6.8 RB1 SIN3A BMI1 RAD21 RFX5 ZNF143 RCOR1 FOS DEK EGR2 IGFBP3 ENSG00000237471 TTC4P1 IGFBP1 RNU7-76P ENSG00000229628 GC07P046311
GH07I045976 Enhancer 1.2 Ensembl ENCODE dbSUPER 19.2 +21.6 21646 4.5 PKNOX1 FOXA2 NEUROD1 SIN3A BMI1 BRCA1 RFX5 EGR1 RCOR1 ATF7 TTC4P1 RNU7-76P ENSG00000237471 ENSG00000229628 LOC102723446
GH07I046032 Enhancer 0.8 FANTOM5 ENCODE 28.6 -33.1 -33084 3.5 SP1 GATA3 ATF3 REST FOSL2 NR2F2 RARA TTC4P1 RNU7-76P ENSG00000237471 ENSG00000229628 GC07M045993 PIR44423
GH07I046015 Enhancer 0.7 Ensembl ENCODE 27.8 -14.8 -14782 1.1 SP1 TFAP4 POLR2A SIN3A RAD21 NR2F2 RARA TTC4P1 RNU7-76P ENSG00000237471 LOC105375264 GC07M045993
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TTC4P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TTC4P1 Gene

Genomic Locations for TTC4P1 Gene
1,158 bases
Minus strand

Genomic View for TTC4P1 Gene

Genes around TTC4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTC4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTC4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTC4P1 Gene

Proteins for TTC4P1 Gene

Post-translational modifications for TTC4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTC4P1 Gene

Domains & Families for TTC4P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTC4P1 Gene

Function for TTC4P1 Gene

Phenotypes From GWAS Catalog for TTC4P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTC4P1 Gene

Localization for TTC4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TTC4P1 Gene

Pathways & Interactions for TTC4P1 Gene

SuperPathways for TTC4P1 Gene

No Data Available

Interacting Proteins for TTC4P1 Gene

Gene Ontology (GO) - Biological Process for TTC4P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TTC4P1 Gene

Drugs & Compounds for TTC4P1 Gene

No Compound Related Data Available

Transcripts for TTC4P1 Gene

mRNA/cDNA for TTC4P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TTC4P1 Gene

No ASD Table

Relevant External Links for TTC4P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TTC4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TTC4P1 Gene

mRNA differential expression in normal tissues according to GTEx for TTC4P1 Gene

This gene is overexpressed in Muscle - Skeletal (x12.6) and Spleen (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of TTC4P1 Gene:

genes like me logo Genes that share expression patterns with TTC4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TTC4P1 Gene

Orthologs for TTC4P1 Gene

Evolution for TTC4P1 Gene

Gene Tree for TTC4P1 (if available)
Gene Tree for TTC4P1 (if available)

No data available for Orthologs for TTC4P1 Gene

Paralogs for TTC4P1 Gene

No data available for Paralogs for TTC4P1 Gene

Variants for TTC4P1 Gene

Additional Variant Information for TTC4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TTC4P1 Gene

Disorders for TTC4P1 Gene

Additional Disease Information for TTC4P1

Genetic Association Database

No disorders were found for TTC4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTC4P1 Gene

Publications for TTC4P1 Gene

  1. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin EJ … Vasan RS (BMC medical genetics 2007) 3 44 58
  2. Beyond single-marker analyses: mining whole genome scans for insights into treatment responses in severe sepsis. (PMID: 22310353) Man M … Garcia JG (The pharmacogenomics journal 2013) 44 58
  3. GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease. (PMID: 21658281) Aouizerat BE … Tseng ZH (BMC cardiovascular disorders 2011) 44 58
  4. A genome-wide association study identifies novel loci associated with circulating IGF-I and IGFBP-3. (PMID: 21216879) Kaplan RC … Wallaschofski H (Human molecular genetics 2011) 44 58
  5. Common variants in 22 loci are associated with QRS duration and cardiac ventricular conduction. (PMID: 21076409) Sotoodehnia N … Arking DE (Nature genetics 2010) 44 58

Products for TTC4P1 Gene

Sources for TTC4P1 Gene

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